RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 IGKV3D-11A0A0A0MRZ8 115 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 GCSHP23434 173 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 TMEM97Q5BJF2 176 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 NUDT11Q96G61 164 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 PGLYRP4Q96LB8 373 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 PAXXQ9BUH6 204 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 GNB4Q9HAV0 340 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.78□□□□□ -0.36
CASC3-201ENST00000264645 LAMTOR5O43504 91 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 GZMHP20718 246 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 C10orf113Q5VZT2 155 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 ADTRPQ96IZ2 230 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 CRIPAKQ8N1N5 446 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 DEPPQ9NTK1 212 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 AMMECR1Q9Y4X0 333 aaPredicted RBP12.78□□□□□ -0.36
CASC3-201ENST00000264645 TMEM50AO95807 157 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 CRYABP02511 175 aaKnown RBP12.78□□□□□ -0.36
CASC3-201ENST00000264645 ADH4P08319 380 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 IL15RAQ13261 267 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 UBE2V1Q13404 147 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 C1orf174Q8IYL3 243 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
CASC3-201ENST00000264645 PPIAL4DF5H284 164 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 RBP4P02753 201 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 CSRP1P21291 193 aaKnown RBP12.77□□□□□ -0.36
CASC3-201ENST00000264645 MEGF9Q9H1U4 602 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 F11RQ9Y624 299 aaKnown RBP12.77□□□□□ -0.36
CASC3-201ENST00000264645 INTS1Q8N201 2190 aaKnown RBP12.77□□□□□ -0.36
CASC3-201ENST00000264645 NKX6-3A6NJ46 265 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 C17orf98A8MV24 154 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 RIPPLY2Q5TAB7 128 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 SLC25A40Q8TBP6 338 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 NABP2Q9BQ15 211 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 SRXN1Q9BYN0 137 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 PCED1AQ9H1Q7 454 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 WDR54Q9H977 334 aa12.77□□□□□ -0.36
CASC3-201ENST00000264645 TRAV9-2A0A087WT02 112 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 ZSWIM8A7E2V4 1837 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 NEU1Q99519 415 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 DYNLRB1Q9NP97 96 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 DNPH1O43598 174 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 SYNGR3O43761 229 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 MT-CO3P00414 261 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 SCGB1C2P0DMR2 95 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 AMMECR1LQ6DCA0 310 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 C6orf15Q6UXA7 325 aaPredicted RBP12.77□□□□□ -0.37
CASC3-201ENST00000264645 C1orf147Q96MC9 270 aaPredicted RBP12.77□□□□□ -0.37
CASC3-201ENST00000264645 LIME1Q9H400 295 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 TCF19Q9Y242 345 aa12.77□□□□□ -0.37
CASC3-201ENST00000264645 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
CASC3-201ENST00000264645 TCF20Q9UGU0 1960 aaKnown RBP12.76□□□□□ -0.37
CASC3-201ENST00000264645 TMEM210A6NLX4 147 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 TIMP3P35625 211 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 CDKN1AP38936 164 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 FOXL1Q12952 345 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 RIGQ13278 110 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 ELOVL5Q9NYP7 299 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 IGKV1-27A0A075B6S5 117 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 IL6RP08887 468 aaPredicted RBP12.76□□□□□ -0.37
CASC3-201ENST00000264645 APELAP0DMC3 54 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 SSTR5P35346 364 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 LYPD6BQ8NI32 183 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 RNF166Q96A37 237 aaPredicted RBP12.76□□□□□ -0.37
CASC3-201ENST00000264645 ZNF524Q96C55 264 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 ZNF430Q9H8G1 570 aaPredicted RBP12.76□□□□□ -0.37
CASC3-201ENST00000264645 A0A0G2JRQ6 117 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 WISP1O95388 367 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 KIR2DS2P43631 304 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 LYZP61626 148 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 ZNF841Q6ZN19 808 aa12.76□□□□□ -0.37
CASC3-201ENST00000264645 SSBP4Q9BWG4 385 aaPredicted RBP12.76□□□□□ -0.37
CASC3-201ENST00000264645 COL25A1Q9BXS0 654 aaPredicted RBP12.76□□□□□ -0.37
CASC3-201ENST00000264645 PGPA6NDG6 321 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 IGHV3-48P01763 117 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 HES1Q14469 280 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 MAJINQ3KP22 176 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 C5orf17Q8NAS9 161 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 RND1Q92730 232 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 MS4A5Q9H3V2 200 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 KLF13Q9Y2Y9 288 aaPredicted RBP12.75□□□□□ -0.37
CASC3-201ENST00000264645 EFNA2O43921 213 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 CA1P00915 261 aaPredicted RBP12.75□□□□□ -0.37
CASC3-201ENST00000264645 RNPS1Q15287 305 aaKnown RBP12.75□□□□□ -0.37
CASC3-201ENST00000264645 TMEM178AQ8NBL3 297 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 CYYR1Q96J86 154 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 C20orf144Q9BQM9 153 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 PRNDQ9UKY0 176 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 OR51B2Q9Y5P1 312 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 IFNL4K9M1U5 179 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 MDP1Q86V88 176 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 SAXO1Q8IYX7 474 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 HSPB7Q9UBY9 170 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 LTBP4Q8N2S1 1624 aa12.75□□□□□ -0.37
CASC3-201ENST00000264645 C8orf88P0DMB2 117 aa12.74□□□□□ -0.37
CASC3-201ENST00000264645 CCL4P13236 92 aa12.74□□□□□ -0.37
CASC3-201ENST00000264645 EPHA8P29322 1005 aaPredicted RBP12.74□□□□□ -0.37
CASC3-201ENST00000264645 ARF6P62330 175 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms