RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 WISP2O76076 250 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 FOSL1P15407 271 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 CCKARP32238 428 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 TDRG1Q3Y452 100 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 ACSF3Q4G176 576 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-201ENST00000263856 OR4P4Q8NGL7 312 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 GP6Q9HCN6 339 aa10.31□□□□□ -0.76
CHMP3-201ENST00000263856 EP300Q09472 2414 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-201ENST00000263856 TPRP12270 2363 aaKnown RBP10.3□□□□□ -0.76
CHMP3-201ENST00000263856 F2Z2F3 143 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 FCN1O00602 326 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 VENTXO95231 258 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 ERVFC1-1P60608 527 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 RPL31P62899 125 aaKnown RBP10.3□□□□□ -0.76
CHMP3-201ENST00000263856 FXYD3Q14802 87 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 ACP7Q6ZNF0 438 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 ZNRF1Q8ND25 227 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 HSPB9Q9BQS6 159 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 PARD6GQ9BYG4 376 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-201ENST00000263856 WDR83OSQ9Y284 106 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 GVINP1Q7Z2Y8 2422 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 NUTF2P61970 127 aaKnown RBP10.3□□□□□ -0.76
CHMP3-201ENST00000263856 FAM201AQ5SY85 155 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 ZBTB34Q8NCN2 500 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 MGST2Q99735 147 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 SEPSECSQ9HD40 501 aaKnown RBP10.3□□□□□ -0.76
CHMP3-201ENST00000263856 SERTAD4Q9NUC0 356 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 TP53TG5Q9Y2B4 290 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 YTHDF2Q9Y5A9 579 aaKnown RBP10.3□□□□□ -0.76
CHMP3-201ENST00000263856 TNRC18O15417 2968 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-201ENST00000263856 SNURFLB1AK76 121 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 CRISP2P16562 243 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 GATA2P23769 480 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-201ENST00000263856 KRTDAPP60985 99 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 PRR31Q5SQ13 230 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 WDR82Q6UXN9 313 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 FAM216AQ8WUB2 273 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 ELOVL5Q9NYP7 299 aa10.3□□□□□ -0.76
CHMP3-201ENST00000263856 A0A1W2PNU3 283 aaPredicted RBP10.29□□□□□ -0.76
CHMP3-201ENST00000263856 M0R143 59 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 GNG10P50151 68 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 HTD2P86397 168 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 ZNF766Q5HY98 468 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 SLC35E4Q6ICL7 350 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 VWA1Q6PCB0 445 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 DEFB108BQ8NET1 73 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 OR1L6Q8NGR2 347 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 HSD17B10Q99714 261 aaKnown RBP10.29□□□□□ -0.76
CHMP3-201ENST00000263856 MRPL18Q9H0U6 180 aaKnown RBP10.29□□□□□ -0.76
CHMP3-201ENST00000263856 KCNIP2Q9NS61 270 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 PLCE1Q9P212 2302 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 PCNX2A6NKB5 2137 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 SERF1AO75920 110 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 MGST1P10620 155 aaKnown RBP10.29□□□□□ -0.76
CHMP3-201ENST00000263856 TIMP3P35625 211 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 CDKN1AP38936 164 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 SPCS3P61009 180 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 SMIM21Q3B7S5 101 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 UTF1Q5T230 341 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 CENPVQ7Z7K6 275 aaPredicted RBP10.29□□□□□ -0.76
CHMP3-201ENST00000263856 OR8I2Q8N0Y5 310 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 S1PR3Q99500 378 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 MRPL37Q9BZE1 423 aaKnown RBP10.29□□□□□ -0.76
CHMP3-201ENST00000263856 ENY2Q9NPA8 101 aa10.29□□□□□ -0.76
CHMP3-201ENST00000263856 TNFSF15O95150 251 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 CGAP01215 116 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 PMCHP20382 165 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 RPL15P61313 204 aaKnown RBP10.28□□□□□ -0.76
CHMP3-201ENST00000263856 COA6Q5JTJ3 125 aaKnown RBP10.28□□□□□ -0.76
CHMP3-201ENST00000263856 DOLPP1Q86YN1 238 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 LRFN3Q9BTN0 628 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 GGTLC1Q9BX51 225 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 TMEM140Q9NV12 185 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 IQCF6A8MYZ5 107 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 OR10J4P0C629 311 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 SOX8P57073 446 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 DNLZQ5SXM8 178 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 NHLRC2Q8NBF2 726 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 CXXC4Q9H2H0 198 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 POLEQ07864 2286 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 OR7C2O60412 319 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 CXorf1O96002 111 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 P0C879 139 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 OR10J1P30954 320 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 DUTP33316 252 aaKnown RBP10.28□□□□□ -0.76
CHMP3-201ENST00000263856 LCN2P80188 198 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 C11orf53Q8IXP5 236 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 CD177Q8N6Q3 437 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 Q8TCH9 128 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 ABCA1O95477 2261 aa10.28□□□□□ -0.76
CHMP3-201ENST00000263856 SPENQ96T58 3664 aaKnown RBP10.28□□□□□ -0.76
CHMP3-201ENST00000263856 HPRT1P00492 218 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 PRDX2P32119 198 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 PDLIM4P50479 330 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 CCL11P51671 97 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 RPP30P78346 268 aaKnown RBP10.27□□□□□ -0.77
CHMP3-201ENST00000263856 PSG5Q15238 335 aa10.27□□□□□ -0.77
CHMP3-201ENST00000263856 MRPL54Q6P161 138 aaKnown RBP10.27□□□□□ -0.77
CHMP3-201ENST00000263856 MOB3BQ86TA1 216 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms