RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 TGFBR3LH3BV60 316 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 DUSP14O95147 198 aaKnown RBP11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 ZP1P60852 638 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 CLDND2Q8NHS1 167 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 MRAP2Q96G30 205 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 ATG2BQ96BY7 2078 aa11.46□□□□□ -0.58
PDGFRB-201ENST00000261799 C2CD4CQ8TF44 421 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 LOC389332A0A1B0GUA5 103 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 ASIPP42127 132 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 SERF2P84101 59 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 FOXF2Q12947 444 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 UNC119Q13432 240 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 ANGPTL6Q8NI99 470 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 TMEM191AQ9H0A3 160 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 SIRT4Q9Y6E7 314 aaPredicted RBP11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 FOXI3A8MTJ6 420 aaPredicted RBP11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 TNFRSF9Q07011 255 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 PQLC2Q6ZP29 291 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 C8orf88P0DMB2 117 aa11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 HNRNPA3P51991 378 aaKnown RBP11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDGFRB-201ENST00000261799 CDRT15L2A8MXV6 281 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 BTF3P20290 206 aaKnown RBP11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 TNFSF18Q9UNG2 199 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 A0A1W2PP11 408 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 C9JCJ5 164 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 IGHV1-46P01743 117 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 AMY1AP04745 511 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 MBNL2Q5VZF2 373 aaKnown RBP11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 NPIPB3Q92617 1050 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 MRPS16Q9Y3D3 137 aaKnown RBP11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 TRBV5-7A0A0A0MS05 114 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 OR8A1Q8NGG7 326 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 SDF2L1Q9HCN8 221 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 IGHV3-49A0A0A0MS15 119 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 B4DEV8 164 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 NUDT3O95989 172 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 SNRPCP09234 159 aaKnown RBP11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 IRF3Q14653 427 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 MIC13Q5XKP0 118 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 TMEM91Q6ZNR0 172 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 CYP2G1PQ6ZSU1 146 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 NEU1Q99519 415 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 RALGAPA2Q2PPJ7 1873 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 DICER1Q9UPY3 1922 aaKnown RBP11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 DLK1P80370 383 aa11.44□□□□□ -0.58
PDGFRB-201ENST00000261799 A0A1B0GVG6 124 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 PPP1R17O96001 155 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 CRPP02741 224 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 ZNF680Q8NEM1 530 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 SAPCD1Q5SSQ6 148 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 S4R3C0 116 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 C12orf77C9JDV5 145 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 GATA3P23771 443 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 CKS2P33552 79 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 HIST3H3Q16695 136 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 A6NNC1 897 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 ELOBQ15370 118 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 TEX261Q6UWH6 196 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 MDS2Q8NDY4 140 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 TNFRSF14Q92956 283 aa11.43□□□□□ -0.58
PDGFRB-201ENST00000261799 RNASE4P34096 147 aaKnown RBP11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 SMUG1Q53HV7 270 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 TOMM20LQ6UXN7 152 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 WNT10AQ9GZT5 417 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 KIR2DL4Q99706 377 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 REPIN1Q9BWE0 567 aaKnown RBP11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 TRAV41A0A0B4J266 112 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 PAPPA-AS1Q5QFB9 102 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 LRP11Q86VZ4 500 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 SGK494Q96LW2 274 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 TXNDC17Q9BRA2 123 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 SRSF6Q13247 344 aaKnown RBP11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 C3orf36Q3SXR2 165 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 ZNF818PQ6ZRF7 136 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 LINC00305Q7Z4B0 112 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 MAP1LC3AQ9H492 121 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 ZNF253O75346 499 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 CA2P00918 260 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 CCL3L1P16619 93 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 MINOS1Q5TGZ0 78 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 MINOS1-NBL1R4GNA1 71 aa11.42□□□□□ -0.58
PDGFRB-201ENST00000261799 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 NCMAPQ5T1S8 102 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 KLF4O43474 513 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 TRAV14DV4A0A0A6YYC5 116 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 MBD3L4A6NDZ8 208 aaPredicted RBP11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 MBD3L3A6NE82 208 aaPredicted RBP11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 MBD3L5A6NJ08 208 aaPredicted RBP11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 AANATQ16613 207 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 ASPHD2Q6ICH7 369 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 MBD3L2Q8NHZ7 208 aaPredicted RBP11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 IFI27L2Q9H2X8 130 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms