RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 TAF15Q92804 592 aaKnown RBP eCLIP11.09□□□□□ -0.63
TMEM260-201ENST00000261556 CTHRC1Q96CG8 243 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 MRAP2Q96G30 205 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 LSM4Q9Y4Z0 139 aaKnown RBP11.09□□□□□ -0.63
TMEM260-201ENST00000261556 IGKV1D-8A0A087WSZ0 117 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 SRSF10O75494 262 aaKnown RBP11.09□□□□□ -0.63
TMEM260-201ENST00000261556 RTL8BQ17RB0 113 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 PMS2CLQ68D20 193 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 DOLPP1Q86YN1 238 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 OR8B12Q8NGG6 310 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 ZNF257Q9Y2Q1 563 aa11.09□□□□□ -0.63
TMEM260-201ENST00000261556 IGHV2-26A0A0B4J1V2 119 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 CD5LO43866 347 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 MT-ND6P03923 174 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 TMEM97Q5BJF2 176 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 WDR82Q6UXN9 313 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 ZDHHC23Q8IYP9 409 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 SLC7A10Q9NS82 523 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 SHANK1Q9Y566 2161 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 KRTCAP3Q53RY4 240 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 ADAMTSL5Q6ZMM2 481 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 NHLRC2Q8NBF2 726 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 PF4V1P10720 104 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 FSTP19883 344 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 SRD5A2P31213 254 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 ZNF141Q15928 474 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 GAB4Q2WGN9 574 aa11.08□□□□□ -0.64
TMEM260-201ENST00000261556 PDCD11Q14690 1871 aaKnown RBP11.08□□□□□ -0.64
TMEM260-201ENST00000261556 SCN10AQ9Y5Y9 1956 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 FOXS1O43638 330 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 VENTXO95231 258 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 ZNF32P17041 273 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 ALKBH6Q3KRA9 238 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 TMEM52Q8NDY8 209 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 HELTA6NFD8 242 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 CA6P23280 308 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 G6PCP35575 357 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 PAX1P15863 534 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 SFTA2Q6UW10 78 aa11.07□□□□□ -0.64
TMEM260-201ENST00000261556 LYZL6O75951 148 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 HLA-DQA1P01909 254 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 HLA-DRB1P01911 266 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 ROM1Q03395 351 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 ETDBQ3ZM63 59 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 FANCMQ8IYD8 2048 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 TMEM14DPA8MWL7 114 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 TAX1BP3O14907 124 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 SPINK2P20155 84 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 PEBP1P30086 187 aaKnown RBP11.06□□□□□ -0.64
TMEM260-201ENST00000261556 CXorf67Q86X51 503 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-201ENST00000261556 SLC22A18ASQ8N1D0 253 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 SSMEM1Q8WWF3 244 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 PLPPR2Q96GM1 343 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 ZNF816Q0VGE8 651 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-201ENST00000261556 DNM1P46Q6ZS02 220 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 LHFPL2Q6ZUX7 228 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 RNF144BQ7Z419 303 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 PP6455Q8WZ26 134 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 SAP30LQ9HAJ7 183 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 GPR27Q9NS67 375 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 IL36BQ9NZH7 164 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 SPRY3O43610 288 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 PDLIM4P50479 330 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 BVES-AS1Q5T3Y7 98 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 FAM162BQ5T6X4 162 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 C1QL2Q7Z5L3 287 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 PRSS3P2Q8NHM4 247 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 TMEM222Q9H0R3 208 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 CACNA1AO00555 2505 aa11.06□□□□□ -0.64
TMEM260-201ENST00000261556 A0A1W2PS18 150 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 HIST1H1AQ02539 215 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-201ENST00000261556 ADTRPQ96IZ2 230 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 C19orf24Q9BVV8 132 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 TMEM140Q9NV12 185 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 SOX21Q9Y651 276 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-201ENST00000261556 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 G3V4G9 280 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 SMIM13P0DJ93 91 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 GATA2P23769 480 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-201ENST00000261556 RAC3P60763 192 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 PSG3Q16557 428 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 CD300EQ496F6 205 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-201ENST00000261556 OR5A1Q8NGJ0 315 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 C5orf30Q96GV9 206 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 CYYR1Q96J86 154 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 SH2D2AQ9NP31 389 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 TNRC6AQ8NDV7 1962 aaKnown RBP11.05□□□□□ -0.64
TMEM260-201ENST00000261556 CCL3P10147 92 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 RNPS1Q15287 305 aaKnown RBP11.05□□□□□ -0.64
TMEM260-201ENST00000261556 PQLC2Q6ZP29 291 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 TMEM136Q6ZRR5 245 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 SSBP4Q9BWG4 385 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-201ENST00000261556 SCRT1Q9BWW7 348 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 UFC1Q9Y3C8 167 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 LTBP1Q14766 1721 aa11.05□□□□□ -0.64
TMEM260-201ENST00000261556 SCO2A0A1W2PP80 73 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 CCL2P13500 99 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 IGFBP2P18065 325 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 TAS2R45P59539 299 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms