RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CT45A1Q5HYN5 189 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 KCNIP4Q6PIL6 250 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 TEPPQ6URK8 271 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 LINC00469Q8N7U9 141 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 CT45A3Q8NHU0 189 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 MALSU1Q96EH3 234 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 TCEAL7Q9BRU2 100 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 MDFIC2A0A1B0GVS7 189 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 ATXN7O15265 892 aaPredicted RBP13.01□□□□□ -0.33
RFX1-201ENST00000254325 GFRA3O60609 400 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 TGIF2LYQ8IUE0 185 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 TGIF2LXQ8IUE1 241 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 ABHD5Q8WTS1 349 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 FAM210BQ96KR6 192 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 IGLV3-9A0A075B6K5 115 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 RBFOX2O43251 390 aaKnown RBP eCLIP13.01□□□□□ -0.33
RFX1-201ENST00000254325 GNB1P62873 340 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 VMA21Q3ZAQ7 101 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 MOB3BQ86TA1 216 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 HAPLN4Q86UW8 402 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 C11orf1Q9H5F2 150 aa13.01□□□□□ -0.33
RFX1-201ENST00000254325 A0A1W2PPQ1 181 aa13□□□□□ -0.33
RFX1-201ENST00000254325 MPDU1O75352 247 aa13□□□□□ -0.33
RFX1-201ENST00000254325 COX7A1P24310 79 aa13□□□□□ -0.33
RFX1-201ENST00000254325 RHOBP62745 196 aa13□□□□□ -0.33
RFX1-201ENST00000254325 ACSM6Q6P461 480 aa13□□□□□ -0.33
RFX1-201ENST00000254325 ZNF436-AS1Q8NC38 126 aaPredicted RBP13□□□□□ -0.33
RFX1-201ENST00000254325 FRZBQ92765 325 aa13□□□□□ -0.33
RFX1-201ENST00000254325 P2RX4Q99571 388 aa13□□□□□ -0.33
RFX1-201ENST00000254325 SIRT7Q9NRC8 400 aa13□□□□□ -0.33
RFX1-201ENST00000254325 COLCA2A8K830 154 aa13□□□□□ -0.33
RFX1-201ENST00000254325 CFHR2P36980 270 aa13□□□□□ -0.33
RFX1-201ENST00000254325 TIMD4Q96H15 378 aa13□□□□□ -0.33
RFX1-201ENST00000254325 GAFA1Q96PS6 74 aa13□□□□□ -0.33
RFX1-201ENST00000254325 IFI27L2Q9H2X8 130 aa13□□□□□ -0.33
RFX1-201ENST00000254325 A0A1B0GW64 132 aa13□□□□□ -0.33
RFX1-201ENST00000254325 ADIPOQQ15848 244 aa13□□□□□ -0.33
RFX1-201ENST00000254325 TRAV3A0A0B4J244 114 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 PPP5D1E7EU14 171 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 F2RL2O00254 374 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 UCNP55089 124 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 PDZD11Q5EBL8 140 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 ZNF343Q6P1L6 599 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 KDF1Q8NAX2 398 aaPredicted RBP12.99□□□□□ -0.33
RFX1-201ENST00000254325 MBD3L1Q8WWY6 194 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 WFIKKN1Q96NZ8 548 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 LINC00312Q9Y6C7 94 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 RPP25LQ8N5L8 163 aaKnown RBP12.99□□□□□ -0.33
RFX1-201ENST00000254325 NUP37Q8NFH4 326 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 DEFA4P12838 97 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 C3orf36Q3SXR2 165 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 OR10A7Q8NGE5 316 aa12.99□□□□□ -0.33
RFX1-201ENST00000254325 RRHO14718 337 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 PPP1R2P9O14990 202 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 KBTBD11O94819 623 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 RPL19P84098 196 aaKnown RBP12.98□□□□□ -0.33
RFX1-201ENST00000254325 TMEM30BQ3MIR4 351 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 RNF212Q495C1 297 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 FAM78BQ5VT40 261 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 VSTM2AQ8TAG5 236 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 TMEM204Q9BSN7 226 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 IGHV3-72A0A0B4J1Y9 119 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 TRAV1-1A0A0B4J248 108 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 IGHV1-69-2A0A0G2JMI3 117 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 CA2P00918 260 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 WNT2P09544 360 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 CHRNB4P30926 498 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 OPRK1P41145 380 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 ZNF788Q6ZQV5 615 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 AURKAIP1Q9NWT8 199 aaPredicted RBP12.98□□□□□ -0.33
RFX1-201ENST00000254325 CHRNA7P36544 502 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 GATA4P43694 442 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 ZNF134P52741 427 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 GNB2P62879 340 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 OR4P4Q8NGL7 312 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 OR1L8Q8NGR8 309 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 AGMATQ9BSE5 352 aa12.98□□□□□ -0.33
RFX1-201ENST00000254325 RPUSD1Q9UJJ7 312 aaKnown RBP12.98□□□□□ -0.33
RFX1-201ENST00000254325 F6UZH7 168 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 C5orf30Q96GV9 206 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 ONECUT1Q9UBC0 465 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 PPIHO43447 177 aaKnown RBP12.97□□□□□ -0.33
RFX1-201ENST00000254325 RNASE6Q93091 150 aaKnown RBP12.97□□□□□ -0.33
RFX1-201ENST00000254325 WDFY4Q6ZS81 3184 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 APOBEC3AP31941 199 aaPredicted RBP12.97□□□□□ -0.33
RFX1-201ENST00000254325 TAS2R45P59539 299 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 TUBA4BQ9H853 241 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 RAXQ9Y2V3 346 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 AP4M1O00189 453 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 DVL1O14640 695 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 OR5G3P0C626 314 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 GALR1P47211 349 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 ERVFRD-1P60508 538 aa12.97□□□□□ -0.33
RFX1-201ENST00000254325 MEF2CQ06413 473 aaPredicted RBP12.97□□□□□ -0.33
RFX1-201ENST00000254325 MRPL20Q9BYC9 149 aaKnown RBP12.97□□□□□ -0.33
RFX1-201ENST00000254325 SPTBN1Q01082 2364 aaKnown RBP12.96□□□□□ -0.33
RFX1-201ENST00000254325 TGIF2-C20orf24A0A0A6YYL0 155 aa12.96□□□□□ -0.33
RFX1-201ENST00000254325 S100A8P05109 93 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms