RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 RNF151Q2KHN1 245 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 FAM169BQ8N8A8 192 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 PPP1R35Q8TAP8 253 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 MALSU1Q96EH3 234 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 SLC25A22Q9H936 323 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 CBLN4Q9NTU7 201 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 H3BQ15 152 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 IGKV1D-33P01593 117 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 IGKV1-33P01594 117 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 NBL1P41271 181 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 PRAMEF5Q5TYX0 476 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 TMEM14EPQ6UXP3 125 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 GFRALQ6UXV0 394 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 HIST3H2BBQ8N257 126 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 Q8WTZ3 238 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 LRFN3Q9BTN0 628 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 SEC14L6B5MCN3 397 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 CYB5BO43169 146 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 P0C879 139 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 Q8TCH9 128 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 HSD17B10Q99714 261 aaKnown RBP13.04□□□□□ -0.32
LRFN1-201ENST00000248668 RAB4BP61018 213 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 RNF7Q9UBF6 113 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 IGLV3-9A0A075B6K5 115 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 FGF7P21781 194 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 LOXL3P58215 753 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 HTD2P86397 168 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 KRTCAP3Q53RY4 240 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 RAB39BQ96DA2 213 aa13.04□□□□□ -0.32
LRFN1-201ENST00000248668 DYSFO75923 2080 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 ZNF66Q6ZN08 573 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 ZNF429Q86V71 674 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 OR10P1Q8NGE3 313 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 PACRGQ96M98 296 aaPredicted RBP13.03□□□□□ -0.32
LRFN1-201ENST00000248668 MMP23AO75900 390 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 ACSM6Q6P461 480 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 Q8NA96 180 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 SCNM1Q9BWG6 230 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 IFI27L2Q9H2X8 130 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 LRBAP50851 2863 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 TACC2O95359 2948 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 FAM90A26D6RGX4 464 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 RAB29O14966 203 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 TCF21O43680 179 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 LHBP01229 141 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 HBE1P02100 147 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 TAGLN2P37802 199 aaKnown RBP13.03□□□□□ -0.32
LRFN1-201ENST00000248668 LYG1Q8N1E2 194 aa13.03□□□□□ -0.32
LRFN1-201ENST00000248668 MAP1LC3B2A6NCE7 125 aa13.02□□□□□ -0.32
LRFN1-201ENST00000248668 TMPRSS2O15393 492 aa13.02□□□□□ -0.32
LRFN1-201ENST00000248668 RPL29P47914 159 aaKnown RBP13.02□□□□□ -0.32
LRFN1-201ENST00000248668 SPACA3Q8IXA5 215 aa13.02□□□□□ -0.32
LRFN1-201ENST00000248668 C1orf174Q8IYL3 243 aa13.02□□□□□ -0.32
LRFN1-201ENST00000248668 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.32
LRFN1-201ENST00000248668 MAP1LC3BQ9GZQ8 125 aa13.02□□□□□ -0.32
LRFN1-201ENST00000248668 C16orf97H3BN30 126 aa13.02□□□□□ -0.33
LRFN1-201ENST00000248668 FAM87AP0C7U9 286 aa13.02□□□□□ -0.33
LRFN1-201ENST00000248668 BSPH1Q075Z2 132 aa13.02□□□□□ -0.33
LRFN1-201ENST00000248668 RHEBQ15382 184 aa13.02□□□□□ -0.33
LRFN1-201ENST00000248668 C17orf58Q2M2W7 97 aa13.02□□□□□ -0.33
LRFN1-201ENST00000248668 C1QL4Q86Z23 238 aa13.02□□□□□ -0.33
LRFN1-201ENST00000248668 ZNF664Q8N3J9 261 aa13.02□□□□□ -0.33
LRFN1-201ENST00000248668 JPT1Q9UK76 154 aa13.02□□□□□ -0.33
LRFN1-201ENST00000248668 DPRXA6NFQ7 191 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 MYOD1P15172 320 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 DLK1P80370 383 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 CT45A1Q5HYN5 189 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 ZNF506Q5JVG8 444 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 OR4A16Q8NH70 328 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 CT45A3Q8NHU0 189 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 LHX4Q969G2 390 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 S1PR3Q99500 378 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 HINT2Q9BX68 163 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 SLC39A9Q9NUM3 307 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 OR4A8P0C604 315 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 TRGC1P0CF51 173 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 TMEM108Q6UXF1 575 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 FRZBQ92765 325 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 OPN1MWP04001 364 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 OPN1MW2P0DN77 364 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 OPN1MW3P0DN78 364 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 TMEM41BQ5BJD5 291 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 TRAT1Q6PIZ9 186 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 GATAD1Q8WUU5 269 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 OR6C3Q9NZP0 311 aa13.01□□□□□ -0.33
LRFN1-201ENST00000248668 SAA2-SAA4A0A096LPE2 208 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 LOC102723971A0A1B0GUV8 181 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 A8MWP6 167 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 SAA2P0DJI9 122 aaPredicted RBP13□□□□□ -0.33
LRFN1-201ENST00000248668 CFHR2P36980 270 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 ZNF705AQ6ZN79 300 aaPredicted RBP13□□□□□ -0.33
LRFN1-201ENST00000248668 GAFA1Q96PS6 74 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 ELOVL1Q9BW60 279 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 HEYLQ9NQ87 328 aaPredicted RBP13□□□□□ -0.33
LRFN1-201ENST00000248668 TET2Q6N021 2002 aaPredicted RBP13□□□□□ -0.33
LRFN1-201ENST00000248668 RAI1Q7Z5J4 1906 aaPredicted RBP13□□□□□ -0.33
LRFN1-201ENST00000248668 A0A1B0GW64 132 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 TMEM11P17152 192 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 ELOBQ15370 118 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms