RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 WDR61Q9GZS3 305 aaKnown RBP18.99■□□□□ 0.63
SYNGR3-201ENST00000248121 SLC35D1Q9NTN3 355 aa18.99■□□□□ 0.63
SYNGR3-201ENST00000248121 SRRM4A7MD48 611 aaKnown RBP18.99■□□□□ 0.63
SYNGR3-201ENST00000248121 FAM157AC9JC47 383 aa18.99■□□□□ 0.63
SYNGR3-201ENST00000248121 RNASEK-C17orf49H0YIS7 233 aa18.99■□□□□ 0.63
SYNGR3-201ENST00000248121 IGHV4-39P01824 125 aa18.99■□□□□ 0.63
SYNGR3-201ENST00000248121 VDAC2P45880 294 aaPredicted RBP18.99■□□□□ 0.63
SYNGR3-201ENST00000248121 PARD6GQ9BYG4 376 aaPredicted RBP18.99■□□□□ 0.63
SYNGR3-201ENST00000248121 SPG11Q96JI7 2443 aa18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 C15orf61A6NNL5 157 aa18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 GOSR1O95249 250 aa18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 ARG1P05089 322 aa18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 IL6RP08887 468 aaPredicted RBP18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 C10orf91Q5T1B1 145 aa18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 OR13D1Q8NGV5 346 aa18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 RAB1CQ92928 201 aa18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 CCL19Q99731 98 aa18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 USP9YO00507 2555 aaPredicted RBP18.98■□□□□ 0.63
SYNGR3-201ENST00000248121 UBE2L5PA0A1B0GUS4 154 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 TAGLNQ01995 201 aaKnown RBP18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 SPSB3Q6PJ21 355 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 SCGB1C1Q8TD33 95 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 ST6GALNAC6Q969X2 333 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 TIMD4Q96H15 378 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 OR8U8P0C7N1 319 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 REG1BP48304 166 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 PRB3Q04118 309 aaPredicted RBP18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 RAB39BQ96DA2 213 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 TMEM14BQ9NUH8 114 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 TCF19Q9Y242 345 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 CELSR2Q9HCU4 2923 aa18.97■□□□□ 0.63
SYNGR3-201ENST00000248121 A0A1B0GV50 99 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 COX6B1P14854 86 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 DVL1P1P54792 670 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 RTL8BQ17RB0 113 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 AKR1C8PQ5T2L2 129 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 OR5AN1Q8NGI8 311 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 H0YJW9 148 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 HRASP01112 189 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 MYOD1P15172 320 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 GPR6P46095 362 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 GNB2P62879 340 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 CCL20P78556 96 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 DEFA5Q01523 94 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 WDR25Q64LD2 544 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 DHRS7BQ6IAN0 325 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 COMMD1Q8N668 190 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 OR10P1Q8NGE3 313 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 OR8B3Q8NGG8 313 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 OR10X1Q8NGY0 326 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 TAF15Q92804 592 aaKnown RBP eCLIP18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 NEIL1Q96FI4 390 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 OR8B2Q96RD0 313 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 PSMG3Q9BT73 122 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 VSIRQ9H7M9 311 aa18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 FOXA2Q9Y261 457 aaPredicted RBP18.96■□□□□ 0.63
SYNGR3-201ENST00000248121 GPR37O15354 613 aa18.95■□□□□ 0.62
SYNGR3-201ENST00000248121 ABHD12Q8N2K0 398 aa18.95■□□□□ 0.62
SYNGR3-201ENST00000248121 OR9G1Q8NH87 305 aa18.95■□□□□ 0.62
SYNGR3-201ENST00000248121 C22orf46C9J442 243 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 ZNF137PP52743 207 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 GUCA2BQ16661 112 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 TMEM170AQ8WVE7 144 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 TMEM147Q9BVK8 224 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 TMEM133Q9H2Q1 129 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 MIOXQ9UGB7 285 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 CARHSP1Q9Y2V2 147 aaKnown RBP18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 DOPEY2Q9Y3R5 2298 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 F8W036 122 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 GUK1Q16774 197 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 ATP6V1FQ16864 119 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 VWC2Q2TAL6 325 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 TMEM186Q96B77 213 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 PINX1Q96BK5 328 aaKnown RBP18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 NABP2Q9BQ15 211 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 RPRMQ9NS64 109 aa18.94■□□□□ 0.62
SYNGR3-201ENST00000248121 FAM71F2Q6NXP2 309 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 BPESC1Q9GZL8 116 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 PATZ1Q9HBE1 687 aaKnown RBP18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 MED13LQ71F56 2210 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 RRHO14718 337 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 H2AFB1P0C5Y9 115 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 SFTA3P0C7M3 94 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 C8orf46Q8TAG6 207 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 SEC11CQ9BY50 192 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 HIPK2Q9H2X6 1198 aa18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 HEYLQ9NQ87 328 aaPredicted RBP18.93■□□□□ 0.62
SYNGR3-201ENST00000248121 UPK2O00526 184 aa18.92■□□□□ 0.62
SYNGR3-201ENST00000248121 LY86O95711 162 aa18.92■□□□□ 0.62
SYNGR3-201ENST00000248121 MDKP21741 143 aaPredicted RBP18.92■□□□□ 0.62
SYNGR3-201ENST00000248121 HSPE1P61604 102 aaKnown RBP18.92■□□□□ 0.62
SYNGR3-201ENST00000248121 BTN1A1Q13410 526 aa18.92■□□□□ 0.62
SYNGR3-201ENST00000248121 DPPA3Q6W0C5 159 aa18.92■□□□□ 0.62
SYNGR3-201ENST00000248121 NBPF19A0A087WUL8 3843 aa18.92■□□□□ 0.62
SYNGR3-201ENST00000248121 SAA1P0DJI8 122 aaPredicted RBP18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 HNF4GQ14541 408 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 CENPVQ7Z7K6 275 aaPredicted RBP18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 PUSL1Q8N0Z8 303 aaKnown RBP18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 CENPEQ02224 2701 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 PPIAL4CA0A0B4J2A2 164 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms