RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 IGHV2-26A0A0B4J1V2 119 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 H0Y980 276 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 AGPAT2O15120 278 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 S1PR2O95136 353 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 IGKV1-5P01602 117 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 CT45A6P0DMU7 189 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 CT45A5P0DMU8 189 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 CT45A7P0DMV0 189 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 CAMLGP49069 296 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 PPT1P50897 306 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 HABP2Q14520 560 aaPredicted RBP10.49□□□□□ -0.73
HIF3A-201ENST00000244302 RHEBQ15382 184 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 ZNF695Q8IW36 515 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 HIST1H2BAQ96A08 127 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 TMEM56Q96MV1 263 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 PCGF1Q9BSM1 259 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 SMIM3Q9BZL3 60 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 TMEM56-RWDD3S4R434 201 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 GPR37O15354 613 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 FCGR3BO75015 233 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 SMIM6P0DI80 62 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 DEFB113Q30KQ7 82 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 TNFRSF14Q92956 283 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 SPIN2AQ99865 258 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 SPIN2BQ9BPZ2 258 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 SCRT1Q9BWW7 348 aa10.49□□□□□ -0.73
HIF3A-201ENST00000244302 ABCA1O95477 2261 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 IGHV3-72A0A0B4J1Y9 119 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 RAB29O14966 203 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 KRASP01116 189 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 SERPINE2P07093 398 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 PAX1P15863 534 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 EPHA1P21709 976 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 G6PCP35575 357 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 ZNF616Q08AN1 781 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 CLEC9AQ6UXN8 241 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 LHFPL4Q7Z7J7 247 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 OR4D5Q8NGN0 318 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 OR10X1Q8NGY0 326 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 RITA1Q96K30 269 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 TCEAL7Q9BRU2 100 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 MRPL20Q9BYC9 149 aaKnown RBP10.48□□□□□ -0.73
HIF3A-201ENST00000244302 RPS10P5Q9NQ39 176 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 IGHV3OR16-10A0A075B7F0 116 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 DUXBA0A1W2PPF3 345 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 UBE2CO00762 179 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 IGKV1-16P04430 117 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 ZNF266Q14584 549 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 AWAT1Q58HT5 328 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 SSX9Q7RTT3 188 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 VMO1Q7Z5L0 202 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 KRTAP1-3Q8IUG1 177 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 GPR146Q96CH1 333 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 BSCL2Q96G97 398 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-201ENST00000244302 CLCC1Q96S66 551 aa10.48□□□□□ -0.73
HIF3A-201ENST00000244302 CREBBPQ92793 2442 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 TNCP24821 2201 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 FLNAP21333 2647 aaKnown RBP10.47□□□□□ -0.73
HIF3A-201ENST00000244302 A0A087X0M5 115 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 A0A096LNT2 108 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 IGHV2-70DA0A0C4DH43 119 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 A0A1B0GX30 115 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 C7orf77A4D0Y5 90 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 C5orf52A6NGY3 159 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 UMAD1C9J7I0 102 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 IGLV1-47P01700 117 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 S100A6P06703 90 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 FBLN7Q53RD9 439 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 OR10A7Q8NGE5 316 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 OR9G1Q8NH87 305 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 C2CD4CQ8TF44 421 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 DDB2Q92466 427 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 ST6GALNAC6Q969X2 333 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 MALSU1Q96EH3 234 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 EIF5A2Q9GZV4 153 aaKnown RBP10.47□□□□□ -0.73
HIF3A-201ENST00000244302 SLC35B3Q9H1N7 401 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 WFDC1Q9HC57 220 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 SOX21Q9Y651 276 aaPredicted RBP10.47□□□□□ -0.73
HIF3A-201ENST00000244302 MXRA5Q9NR99 2828 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 PLXNB1O43157 2135 aa10.47□□□□□ -0.73
HIF3A-201ENST00000244302 PIGBOS1A0A0B4J2F0 54 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 BTBD17A6NE02 478 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 PRH1P02810 166 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 RAB7AP51149 207 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 NMSQ5H8A3 153 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 CXorf66Q5JRM2 361 aaPredicted RBP10.46□□□□□ -0.73
HIF3A-201ENST00000244302 ZFP82Q8N141 532 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 ZBTB34Q8NCN2 500 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 OR4P4Q8NGL7 312 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 TBX15Q96SF7 602 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 UNKLQ9H9P5 680 aaKnown RBP10.46□□□□□ -0.73
HIF3A-201ENST00000244302 RCL1Q9Y2P8 373 aaKnown RBP10.46□□□□□ -0.73
HIF3A-201ENST00000244302 CUBNO60494 3623 aa10.46□□□□□ -0.73
HIF3A-201ENST00000244302 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.74
HIF3A-201ENST00000244302 SRRM4A7MD48 611 aaKnown RBP10.46□□□□□ -0.74
HIF3A-201ENST00000244302 ITGB1BP1O14713 200 aa10.46□□□□□ -0.74
HIF3A-201ENST00000244302 PITX3O75364 302 aa10.46□□□□□ -0.74
HIF3A-201ENST00000244302 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.74
HIF3A-201ENST00000244302 MMP9P14780 707 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms