RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 PRRX1P54821 245 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 SRSF3P84103 164 aaKnown RBP11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 TLE4Q04727 773 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 IL34Q6ZMJ4 242 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 PDPNQ86YL7 162 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 LILRB2Q8N423 598 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 OR4P4Q8NGL7 312 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 TMEM170AQ8WVE7 144 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 LHX4Q969G2 390 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 FLYWCH2Q96CP2 140 aaKnown RBP11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 ONECUT1Q9UBC0 465 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 DOPEY1Q5JWR5 2465 aa11.15□□□□□ -0.62
SNRNP27-201ENST00000244227 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.63
SNRNP27-201ENST00000244227 BUB1B-PAK6H3BSN5 160 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 IGLV2-23P01705 113 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 OR8U8P0C7N1 319 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 COX7A1P24310 79 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 ZFP36P26651 326 aaKnown RBP11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 F2RL1P55085 397 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 ARF6P62330 175 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 SRSF1Q07955 248 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 TUSC1Q2TAM9 212 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 UQCC3Q6UW78 93 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 HARBI1Q96MB7 349 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 SPOCK3Q9BQ16 436 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 WDR61Q9GZS3 305 aaKnown RBP11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 UMAD1C9J7I0 102 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 KRBOX1C9JBD0 128 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 TRIM77I1YAP6 450 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 KBTBD11O94819 623 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 IL3RAP26951 378 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 CAMLGP49069 296 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 ATP6V1FQ16864 119 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 VWC2Q2TAL6 325 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 LDLRAD2Q5SZI1 272 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 PNKDQ8N490 385 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 BPIFCQ8NFQ6 507 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 OR10P1Q8NGE3 313 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 OR4C13Q8NGP0 309 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 RITA1Q96K30 269 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 AIFM2Q9BRQ8 373 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 HEYLQ9NQ87 328 aaPredicted RBP11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 WASHC3Q9Y3C0 194 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
SNRNP27-201ENST00000244227 hCG_1809904A0A1W2PP81 198 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 A0A1W2PR64 198 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 A0A1W2PRV1 198 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 PRSS46E5RG02 174 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 M0R1W7 72 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 RRHO14718 337 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 IGHV2-5P01817 119 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 PRH1P02810 166 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 MDKP21741 143 aaPredicted RBP11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 SP5Q6BEB4 398 aaPredicted RBP11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 HCP5Q6MZN7 132 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 SCGB1C1Q8TD33 95 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 HIPK2Q9H2X6 1198 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 ZNF257Q9Y2Q1 563 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 FBXO7Q9Y3I1 522 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 USP9XQ93008 2570 aaPredicted RBP11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 FLNCQ14315 2725 aa11.13□□□□□ -0.63
SNRNP27-201ENST00000244227 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 MC5RP33032 325 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 AKR1C1Q04828 323 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 SLC25A24Q6NUK1 477 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 OR11H6Q8NGC7 330 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 FAM213BQ8TBF2 198 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 PINX1Q96BK5 328 aaKnown RBP11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 PSMG3Q9BT73 122 aaPredicted RBP11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 TMEM147Q9BVK8 224 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 SCRT1Q9BWW7 348 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 IGHV3-72A0A0B4J1Y9 119 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 UBE2L5PA0A1B0GUS4 154 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 IFNA10P01566 189 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 PRTN3P24158 256 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 HOXA1P49639 335 aaPredicted RBP11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 PAX2Q02962 417 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 ZNF616Q08AN1 781 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 MRGPRG-AS1Q2M3A8 158 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 CENPVQ7Z7K6 275 aaPredicted RBP11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 TMEM167AQ8TBQ9 72 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 CLCC1Q96S66 551 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 BPESC1Q9GZL8 116 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 MS4A7Q9GZW8 240 aaPredicted RBP11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 SIRT7Q9NRC8 400 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 UQCC1Q9NVA1 299 aa11.12□□□□□ -0.63
SNRNP27-201ENST00000244227 AGPAT2O15120 278 aa11.11□□□□□ -0.63
SNRNP27-201ENST00000244227 OPN1MWP04001 364 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms