RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 C17orf98A8MV24 154 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 LINC01387J3KSC0 135 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 APOMO95445 188 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 DLL3Q9NYJ7 618 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 SOX21Q9Y651 276 aaPredicted RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 LDLRAD2Q5SZI1 272 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 PHF7Q9BWX1 381 aaPredicted RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 AICDAQ9GZX7 198 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 CEACAM18A8MTB9 384 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 NPC2P61916 151 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 ZNF124Q15973 351 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 FGFRL1Q8N441 504 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 GALNT14Q96FL9 552 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 A0A0A6YYD4 124 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 CKS2P33552 79 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 ICAM4Q14773 271 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 CHRNA10Q9GZZ6 450 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 H3BUT2 72 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 LINC00869P0C866 280 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 WIPI2Q9Y4P8 454 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 GAB4Q2WGN9 574 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 ZNF837Q96EG3 531 aaPredicted RBP6.42□□□□□ -1.38
RIF1-201ENST00000243326 PRSS8Q16651 343 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 CD200R1LQ6Q8B3 271 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 PQLC2LA1A4F0 135 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 M0QZ24 198 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 CDS2O95674 445 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 LY6G6FQ5SQ64 297 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 UNQ9370/PRO34162Q6UXP9 181 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 TMEM136Q6ZRR5 245 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 TSPAN13O95857 204 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 FOLR2P14207 255 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 PMS2CLQ68D20 193 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 RBPMS2Q6ZRY4 209 aaKnown RBP6.42□□□□□ -1.38
RIF1-201ENST00000243326 ITLN1Q8WWA0 313 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 J3QT63 122 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 TEX30Q5JUR7 227 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 DEGS2Q6QHC5 323 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 PPIAL4DF5H284 164 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 NYNRINQ9P2P1 1898 aaKnown RBP6.42□□□□□ -1.38
RIF1-201ENST00000243326 FKBP2P26885 142 aaKnown RBP6.42□□□□□ -1.38
RIF1-201ENST00000243326 KIR2DL1P43626 348 aaPredicted RBP6.42□□□□□ -1.38
RIF1-201ENST00000243326 KIR2DL2P43627 348 aaPredicted RBP6.42□□□□□ -1.38
RIF1-201ENST00000243326 LY6EQ16553 131 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 NEUROG3Q9Y4Z2 214 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 IGKV3D-20A0A0C4DH25 116 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 A0A0G2JMM0 328 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 A0A1W2PPB8 328 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 A0A1W2PRS3 328 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 KIR3DP1A8MWS1 328 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 RND2P52198 227 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 OR4B1Q8NGF8 309 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 HOXA5P20719 270 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 TNFRSF9Q07011 255 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 KLHDC3Q9BQ90 382 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 CHST5Q9GZS9 411 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 INSIG2Q9Y5U4 225 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 PRSS2P07478 247 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 LCN12Q6JVE5 192 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 SARAFQ96BY9 339 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 FN1P02751 2386 aaKnown RBP6.42□□□□□ -1.38
RIF1-201ENST00000243326 FAM74A4Q5TZK3 123 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 Q8IYB0 196 aa6.42□□□□□ -1.38
RIF1-201ENST00000243326 IGHV4-39P01824 125 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 STPG1Q5TH74 334 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 KCNK17Q96T54 332 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 RNF7Q9UBF6 113 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 BMI1P35226 326 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 LSM6P62312 80 aaKnown RBP6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
RIF1-201ENST00000243326 GLMPQ8WWB7 406 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 LINC01590Q5TEZ4 76 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 STPG3Q8N7X2 389 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 WNT5BQ9H1J7 359 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 OR2T8A6NH00 312 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 FOXI3A8MTJ6 420 aaPredicted RBP6.41□□□□□ -1.38
RIF1-201ENST00000243326 MIR17HGQ75NE6 70 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 IGKV1D-13A0A0B4J2D9 117 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 DPRXA6NFQ7 191 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 IGKV1-13P0DP09 117 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 VAX1Q5SQQ9 334 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 MVB12AQ96EY5 273 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 TLN1Q9Y490 2541 aaKnown RBP6.41□□□□□ -1.38
RIF1-201ENST00000243326 C5orf63A6NC05 138 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 TTC32Q5I0X7 151 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 RNASEH2CQ8TDP1 164 aaKnown RBP6.41□□□□□ -1.38
RIF1-201ENST00000243326 CTSSP25774 331 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms