RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RBM14Q96PK6 669 aaKnown RBP12.87□□□□□ -0.35
DDX55-201ENST00000238146 HEYLQ9NQ87 328 aaPredicted RBP12.87□□□□□ -0.35
DDX55-201ENST00000238146 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 FCN1O00602 326 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 VDAC2P45880 294 aaPredicted RBP12.87□□□□□ -0.35
DDX55-201ENST00000238146 LGALS4P56470 323 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 TMPRSS3P57727 454 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 GAGE1Q13065 139 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 BAGE2Q86Y30 109 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 OR1L6Q8NGR2 347 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 C1orf159Q96HA4 380 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 VAMP8Q9BV40 100 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 PPP1R14DQ9NXH3 145 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 FCGR3BO75015 233 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 DUTP33316 252 aaKnown RBP12.86□□□□□ -0.35
DDX55-201ENST00000238146 IER3P46695 156 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 TNFSF10P50591 281 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 RPP30P78346 268 aaKnown RBP12.86□□□□□ -0.35
DDX55-201ENST00000238146 MRPL49Q13405 166 aaKnown RBP12.86□□□□□ -0.35
DDX55-201ENST00000238146 PRAMEF5Q5TYX0 476 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 ABHD12Q8N2K0 398 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 Q8TCH9 128 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 SSMEM1Q8WWF3 244 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 OBP2BQ9NPH6 170 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 GFRA3O60609 400 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 GCHFRP30047 84 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 Q0VG73 95 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 DCTN5Q9BTE1 182 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
DDX55-201ENST00000238146 DCAF16Q9NXF7 216 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 RNF114Q9Y508 228 aa12.86□□□□□ -0.35
DDX55-201ENST00000238146 MPV17P39210 176 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 TGFBR3Q03167 851 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 ACP7Q6ZNF0 438 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 LINC00696Q6ZRV3 163 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 VKORC1L1Q8N0U8 176 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 OR4A16Q8NH70 328 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 SAMD10Q9BYL1 202 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 LSM4Q9Y4Z0 139 aaKnown RBP12.85□□□□□ -0.35
DDX55-201ENST00000238146 SNURFLB1AK76 121 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 LTC4SQ16873 150 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 MMD2Q8IY49 270 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 TDHQ8IZJ6 230 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 MAFAQ8NHW3 353 aaPredicted RBP12.85□□□□□ -0.35
DDX55-201ENST00000238146 EAF1Q96JC9 268 aaPredicted RBP12.85□□□□□ -0.35
DDX55-201ENST00000238146 PTPRBP23467 1997 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 EFNB3Q15768 340 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 C11orf52Q96A22 123 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 PLPPR2Q96GM1 343 aa12.85□□□□□ -0.35
DDX55-201ENST00000238146 HCFC1P51610 2035 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 TRAV3A0A0B4J244 114 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 FAM90A9PA6NNJ1 464 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 ZNF891A8MT65 544 aaPredicted RBP12.84□□□□□ -0.35
DDX55-201ENST00000238146 C9JCJ5 164 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 C15orf65H3BRN8 121 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 FOXH1O75593 365 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 IL6RP08887 468 aaPredicted RBP12.84□□□□□ -0.35
DDX55-201ENST00000238146 RELQ04864 619 aaPredicted RBP12.84□□□□□ -0.35
DDX55-201ENST00000238146 KLF14Q8TD94 323 aaPredicted RBP12.84□□□□□ -0.35
DDX55-201ENST00000238146 FBXL7Q9UJT9 491 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 TRGV10A0A0A0MS01 117 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 A8MXE2 369 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 SP1P08047 785 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 SFTPCP11686 197 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 GPR12P47775 334 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 OR5I1Q13606 314 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 BATFQ16520 125 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 RPEL1Q2QD12 228 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 ARSJQ5FYB0 599 aaPredicted RBP12.84□□□□□ -0.35
DDX55-201ENST00000238146 ST6GALNAC3Q8NDV1 305 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 OR52E5Q8NH55 327 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 MSL2Q9HCI7 577 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 NPVFQ9HCQ7 196 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 LY96Q9Y6Y9 160 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 V9GYV3 84 aa12.84□□□□□ -0.35
DDX55-201ENST00000238146 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
DDX55-201ENST00000238146 RELBQ01201 579 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 WDR82Q6UXN9 313 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 TMEM105Q8N8V8 129 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 GNB4Q9HAV0 340 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 SPINT2O43291 252 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 TNFSF15O95150 251 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 GPX1P07203 203 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 HTD2P86397 168 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 OR8I2Q8N0Y5 310 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 SIGLECL1Q8N7X8 197 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 Q8N976 141 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 GNB1LQ9BYB4 327 aa12.83□□□□□ -0.36
DDX55-201ENST00000238146 URB1O60287 2271 aaKnown RBP12.82□□□□□ -0.36
DDX55-201ENST00000238146 ADH4P08319 380 aa12.82□□□□□ -0.36
DDX55-201ENST00000238146 MEOX1P50221 254 aa12.82□□□□□ -0.36
DDX55-201ENST00000238146 RHOBP62745 196 aa12.82□□□□□ -0.36
DDX55-201ENST00000238146 STPG3Q8N7X2 389 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms