RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 OTOFQ9HC10 1997 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 HRKO00198 91 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 IGFBP2P18065 325 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 SBF2Q86WG5 1849 aa10.95□□□□□ -0.66
VAMP4-201ENST00000236192 A0A1W2PPM0 123 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 IFNL4K9M1U5 179 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 ENSAO43768 121 aaKnown RBP10.94□□□□□ -0.66
VAMP4-201ENST00000236192 MRPL43Q8N983 215 aaKnown RBP10.94□□□□□ -0.66
VAMP4-201ENST00000236192 YPEL5P62699 121 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 YPEL4Q96NS1 127 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 AMMECR1Q9Y4X0 333 aaPredicted RBP10.94□□□□□ -0.66
VAMP4-201ENST00000236192 NYNRINQ9P2P1 1898 aaKnown RBP10.94□□□□□ -0.66
VAMP4-201ENST00000236192 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.94□□□□□ -0.66
VAMP4-201ENST00000236192 TMEM52Q8NDY8 209 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 IGKV1D-8A0A087WSZ0 117 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 SHISA8B8ZZ34 492 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 GABRG2P18507 467 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 EGR4Q05215 589 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 SLC23A3Q6PIS1 610 aa10.94□□□□□ -0.66
VAMP4-201ENST00000236192 C9orf172C9J069 976 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 QRFPP83859 136 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 C19orf24Q9BVV8 132 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 LHFPL6Q9Y693 200 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 C22orf46C9J442 243 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 OR1D5P58170 312 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 LDLRAD1Q5T700 205 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 FLYWCH2Q96CP2 140 aaKnown RBP10.93□□□□□ -0.66
VAMP4-201ENST00000236192 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 ATP5L2Q7Z4Y8 100 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 RASL10BQ96S79 203 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 IGHV3-15A0A0B4J1V0 119 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 SYNGR1O43759 233 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 CLDN14O95500 239 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 ABHD17BQ5VST6 288 aa10.93□□□□□ -0.66
VAMP4-201ENST00000236192 BCL6BQ8N143 479 aaPredicted RBP10.93□□□□□ -0.66
VAMP4-201ENST00000236192 NKX2-8O15522 239 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 CGAP01215 116 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 IGLC1P0CG04 106 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 LHX2P50458 406 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 FOXB1Q99853 325 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 STRCP1A6NGW2 1772 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 A8MWV9 139 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 TAX1BP3O14907 124 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 ZNF32P17041 273 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 ANOS1P23352 680 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 PRSS12P56730 875 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 CEACAM21Q3KPI0 293 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 SMIM20Q8N5G0 67 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 STPG3Q8N7X2 389 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 B5MCH6 92 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 FGF12P61328 243 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 NDUFB8O95169 186 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 C8orf88P0DMB2 117 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 MEF2CQ06413 473 aaPredicted RBP10.92□□□□□ -0.66
VAMP4-201ENST00000236192 ZNF645Q8N7E2 425 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 GGTLC1Q9BX51 225 aa10.92□□□□□ -0.66
VAMP4-201ENST00000236192 THAP10Q9P2Z0 257 aaPredicted RBP10.92□□□□□ -0.66
VAMP4-201ENST00000236192 HARBI1Q96MB7 349 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 SFXN3Q9BWM7 321 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 MAP1LC3AQ9H492 121 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 NUPR1O60356 82 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 ZNF766Q5HY98 468 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 ANAPC10Q9UM13 185 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 OOEPA6NGQ2 149 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 CKS2P33552 79 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 TMEM164Q5U3C3 297 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 WFDC12Q8WWY7 111 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 TMEM50AO95807 157 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 PEBP1P30086 187 aaKnown RBP10.91□□□□□ -0.66
VAMP4-201ENST00000236192 TBC1D28Q2M2D7 210 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 OR4F17Q8NGA8 305 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 SLC37A2Q8TED4 501 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 RARRES3Q9UL19 164 aa10.91□□□□□ -0.66
VAMP4-201ENST00000236192 TRAV8-6A0A0B4J262 113 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 DEFB108AA8MXU0 73 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.66
VAMP4-201ENST00000236192 CELA3AP09093 270 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 ATP5IP56385 69 aaPredicted RBP10.9□□□□□ -0.66
VAMP4-201ENST00000236192 LINC00696Q6ZRV3 163 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 YAE1D1Q9NRH1 226 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 SAA2-SAA4A0A096LPE2 208 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 IGHV3-20A0A0C4DH32 117 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 TNFSF14O43557 240 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 GAGE12JA6NER3 117 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 GAGE7O76087 117 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 GAGE12FP0CL80 117 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 GAGE12GP0CL81 117 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 GAGE12IP0CL82 117 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 GAGE4Q13068 117 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 RABAC1Q9UI14 185 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 NRG2O14511 850 aaPredicted RBP10.9□□□□□ -0.66
VAMP4-201ENST00000236192 ORM2P19652 201 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 NMSQ5H8A3 153 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 SFTPA2Q8IWL1 248 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 SFTPA1Q8IWL2 248 aa10.9□□□□□ -0.66
VAMP4-201ENST00000236192 SMAD7O15105 426 aaKnown RBP10.89□□□□□ -0.67
VAMP4-201ENST00000236192 IL11P20809 199 aa10.89□□□□□ -0.67
VAMP4-201ENST00000236192 KIR2DL2P43627 348 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms