RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CEACAM3P40198 252 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 LGALS4P56470 323 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 RUSC1-AS1Q66K80 236 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 WFDC11Q8NEX6 87 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 OR4A16Q8NH70 328 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 CFHR4Q92496 578 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 ZDHHC16Q969W1 377 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 GON7Q9BXV9 100 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 RBKSQ9H477 322 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 C7orf69Q9H7B7 122 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 TNCP24821 2201 aa14.96□□□□□ -0.01
SNX17-201ENST00000233575 CCDC168Q8NDH2 2452 aa14.96□□□□□ -0.02
SNX17-201ENST00000233575 FAM24AA6NFZ4 105 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 H3BP45 60 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 SNAPC5O75971 98 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 S100A1P23297 94 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 RPL12P30050 165 aaKnown RBP14.95□□□□□ -0.02
SNX17-201ENST00000233575 SAA4P35542 130 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 UBE2KP61086 200 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 PRSS57Q6UWY2 283 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 LINC01356Q8N9X3 169 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 BSCL2Q96G97 398 aaPredicted RBP14.95□□□□□ -0.02
SNX17-201ENST00000233575 AUP1Q9Y679 476 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 TRAV40A0A0B4J280 105 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 FAM90A9PA6NNJ1 464 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 AVPP01185 164 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 MINOS1Q5TGZ0 78 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 MINOS1-NBL1R4GNA1 71 aa14.95□□□□□ -0.02
SNX17-201ENST00000233575 A0A0D9SG52 128 aa14.94□□□□□ -0.02
SNX17-201ENST00000233575 FAM90A26D6RGX4 464 aa14.94□□□□□ -0.02
SNX17-201ENST00000233575 P2RY1P47900 373 aa14.94□□□□□ -0.02
SNX17-201ENST00000233575 CAV2P51636 162 aa14.94□□□□□ -0.02
SNX17-201ENST00000233575 PUSL1Q8N0Z8 303 aaKnown RBP14.94□□□□□ -0.02
SNX17-201ENST00000233575 SLA2Q9H6Q3 261 aa14.94□□□□□ -0.02
SNX17-201ENST00000233575 TPSG1Q9NRR2 321 aa14.94□□□□□ -0.02
SNX17-201ENST00000233575 C15orf61A6NNL5 157 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 NPFFO15130 113 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 SLC25A17O43808 307 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 VENTXO95231 258 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 IGHV4-38-2P0DP08 117 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 PVALBP20472 110 aaPredicted RBP14.93□□□□□ -0.02
SNX17-201ENST00000233575 VAMP2P63027 116 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 AARDQ4LEZ3 155 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 BRD3OSQ6XYD6 125 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 OR8H3Q8N146 312 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 OR2C3Q8N628 320 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 TRAV20A0A0B4J274 112 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 IGSF23A1L1A6 192 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 UPK2O00526 184 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 KBTBD11O94819 623 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 OPN1MWP04001 364 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 OPN1MW2P0DN77 364 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 OPN1MW3P0DN78 364 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 IGHV4-31P0DP07 118 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 NUP62P37198 522 aaPredicted RBP14.93□□□□□ -0.02
SNX17-201ENST00000233575 NHLH2Q02577 135 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 HABP2Q14520 560 aaPredicted RBP14.93□□□□□ -0.02
SNX17-201ENST00000233575 TMEM249Q2WGJ8 235 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 ZC4H2Q9NQZ6 224 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 LYRM2Q9NU23 88 aaPredicted RBP14.93□□□□□ -0.02
SNX17-201ENST00000233575 BET1LQ9NYM9 111 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 TBL2Q9Y4P3 447 aaKnown RBP14.93□□□□□ -0.02
SNX17-201ENST00000233575 ITPR3Q14573 2671 aa14.93□□□□□ -0.02
SNX17-201ENST00000233575 RGS13O14921 159 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 TGFAP01135 160 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 IFNA17P01571 189 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 ARHGDIBP52566 201 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 HNF4GQ14541 408 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 RAB40CQ96S21 281 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 SMIM3Q9BZL3 60 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 TMEM14BQ9NUH8 114 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 IGHV1-69DA0A0B4J2H0 117 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 BCL2L11O43521 198 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 CFDP00746 253 aaPredicted RBP14.92□□□□□ -0.02
SNX17-201ENST00000233575 IGKV1D-33P01593 117 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 IGKV1-33P01594 117 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 IGHV1-69P01742 117 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 ZNF429Q86V71 674 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 CIARTQ8N365 385 aaPredicted RBP14.92□□□□□ -0.02
SNX17-201ENST00000233575 TMEM252Q8N6L7 170 aa14.92□□□□□ -0.02
SNX17-201ENST00000233575 FOXA2Q9Y261 457 aaPredicted RBP14.92□□□□□ -0.02
SNX17-201ENST00000233575 SOX21Q9Y651 276 aaPredicted RBP14.92□□□□□ -0.02
SNX17-201ENST00000233575 PLXNB1O43157 2135 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 KANTRA0A1W2PQU2 76 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 GPR137BO60478 399 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 C4BPBP20851 252 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 EWSR1Q01844 656 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNX17-201ENST00000233575 PJVKQ0ZLH3 352 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 MRGPRG-AS1Q2M3A8 158 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 DTD1Q8TEA8 209 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 PSENENQ9NZ42 101 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 WSB1Q9Y6I7 421 aa14.91□□□□□ -0.02
SNX17-201ENST00000233575 CREBBPQ92793 2442 aa14.9□□□□□ -0.02
SNX17-201ENST00000233575 CEBPZOSA8MTT3 80 aa14.9□□□□□ -0.02
SNX17-201ENST00000233575 CST7O76096 145 aa14.9□□□□□ -0.02
SNX17-201ENST00000233575 SNRNP70P08621 437 aaKnown RBP14.9□□□□□ -0.02
SNX17-201ENST00000233575 CD1BP29016 333 aa14.9□□□□□ -0.02
SNX17-201ENST00000233575 LGALS7P47929 136 aa14.9□□□□□ -0.02
SNX17-201ENST00000233575 KLF17Q5JT82 389 aaPredicted RBP14.9□□□□□ -0.02
SNX17-201ENST00000233575 CCDC144NLQ6NUI1 221 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms