RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 IGKV1-33P01594 117 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 Q6P435 159 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 WDR86Q86TI4 376 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR4B1Q8NGF8 309 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 WDYHV1Q96HA8 205 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR4C12Q96R67 309 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 SLC35D1Q9NTN3 355 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 SERTAD4Q9NUC0 356 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 LOXL2Q9Y4K0 774 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 ZNF253O75346 499 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 HYPMO75409 117 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 MT-CO3P00414 261 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 TNFSF4P23510 183 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 GNG3P63215 75 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 C6orf15Q6UXA7 325 aaPredicted RBP7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 CORO2AQ92828 525 aa7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 NEIL1Q96FI4 390 aaPredicted RBP7.89□□□□□ -1.15
HLA-DOA-201ENST00000229829 TRAV1-1A0A0B4J248 108 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 CEBPDP49716 269 aaPredicted RBP7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 TCTAP57738 103 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 ALKBH6Q3KRA9 238 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 NAA38Q9BRA0 125 aaKnown RBP7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 TTTY12Q9BZ98 90 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 SH3BGRL2Q9UJC5 107 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 COX11Q9Y6N1 276 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 SMG1Q96Q15 3661 aaKnown RBP7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 PLCE1Q9P212 2302 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR2H2O95918 312 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 FRMD6-AS1P0C7T7 363 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 S100GP29377 79 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 OCIAD2Q56VL3 154 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR10G4Q8NGN3 311 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR10G9Q8NGN4 311 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR10G7Q8NGN6 311 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 FAM173AQ9BQD7 235 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 CST9LQ9H4G1 147 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 TRAPPC2LQ9UL33 140 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 ABCA1O95477 2261 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 RAMP3O60896 148 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 SYNGR4O95473 234 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 TFF1P04155 84 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 CELA3BP08861 270 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 ZNF883P0CG24 379 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 GABRA2P47869 451 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 HBG1P69891 147 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 HBG2P69892 147 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 PLP2Q04941 152 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 LRRC75BQ2VPJ9 315 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 RPP25LQ8N5L8 163 aaKnown RBP7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 DRAM1Q8N682 238 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 TMEM251Q8N6I4 163 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 UHRF2Q96PU4 802 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 CLN8Q9UBY8 286 aa7.88□□□□□ -1.15
HLA-DOA-201ENST00000229829 TRBV6-6A0A0A6YYG2 114 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 CDIPTO14735 213 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 ATP5G3P48201 142 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 LINC00205P59089 165 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR1C1Q15619 314 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 AMMECR1LQ6DCA0 310 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 MRPL54Q6P161 138 aaKnown RBP7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 GCNT2Q8N0V5 402 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 FGFRL1Q8N441 504 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 TCTEX1D1Q8N7M0 179 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 MBD3L1Q8WWY6 194 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 NRN1Q9NPD7 142 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 TPRP12270 2363 aaKnown RBP7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 SMPD2O60906 423 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 ARR3P36575 388 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 HLA-DRB5Q30154 266 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 MDP1Q86V88 176 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 KLHDC1Q8N7A1 406 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 ORAOV1Q8WV07 137 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 WDR61Q9GZS3 305 aaKnown RBP7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 CLCF1Q9UBD9 225 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 MPC1Q9Y5U8 109 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 SPTBN2O15020 2390 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR2T8A6NH00 312 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 K7ERU9 68 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 KRASP01116 189 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 SLC25A6P12236 298 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 PAFAH1B2P68402 229 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 SLC38A11Q08AI6 406 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 ABHD17BQ5VST6 288 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 TEX43Q6ZNM6 134 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 SCCPDHQ8NBX0 429 aa7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 LSM10Q969L4 123 aaKnown RBP7.87□□□□□ -1.15
HLA-DOA-201ENST00000229829 A0A1W2PNU3 283 aaPredicted RBP7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 OR5B21A6NL26 309 aa7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 RNF212BA8MTL3 300 aa7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 C9orf172C9J069 976 aa7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 SNAI2O43623 268 aa7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 GNG7O60262 68 aa7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 CIDEAO60543 219 aa7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 SAP30O75446 220 aa7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 PDLIM4P50479 330 aa7.86□□□□□ -1.15
HLA-DOA-201ENST00000229829 EDDM3BP56851 147 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms