RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 STEAP1BQ6NZ63 245 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 MMD2Q8IY49 270 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 CMTM1Q8IZ96 169 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 LINC00482Q8N8I6 264 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 TMEM167AQ8TBQ9 72 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 C4orf3Q8WVX3 66 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 SRSF12Q8WXF0 261 aaKnown RBP9.86□□□□□ -0.83
LSM5-201ENST00000223084 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 PHB2Q99623 299 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 ALX4Q9H161 411 aaPredicted RBP9.86□□□□□ -0.83
LSM5-201ENST00000223084 ZNF355PQ9NSJ1 428 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 TRAV3A0A0B4J244 114 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 A6NHS1 94 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 CCL24O00175 119 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 GSTZ1O43708 216 aaPredicted RBP9.85□□□□□ -0.83
LSM5-201ENST00000223084 HPRT1P00492 218 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 ZNF735P0CB33 412 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 PGAM2P15259 253 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 TBPP20226 339 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 LPAR6P43657 344 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 PPP5CP53041 499 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 UCP3P55916 312 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 RAB25P57735 213 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 TPPP2P59282 170 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 DEFA5Q01523 94 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 DEFA6Q01524 100 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 SSBP1Q04837 148 aaKnown RBP9.85□□□□□ -0.83
LSM5-201ENST00000223084 SCGB2B2Q4G0G5 96 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 ZNF585BQ52M93 769 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 SAMD5Q5TGI4 173 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 FOXB2Q5VYV0 432 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 OR4A47Q6IF82 309 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 LPCAT3Q6P1A2 487 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 TBC1D26Q86UD7 250 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 LHFPL1Q86WI0 220 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 SLC38A6Q8IZM9 456 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 ARRDC1Q8N5I2 433 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 POC5Q8NA72 575 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 WFDC9Q8NEX5 89 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 OR5M8Q8NGP6 311 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 VSTM2AQ8TAG5 236 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 DGCR14Q96DF8 476 aaKnown RBP9.85□□□□□ -0.83
LSM5-201ENST00000223084 UBE2E2Q96LR5 201 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 P2RX4Q99571 388 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 RABL2AQ9UBK7 228 aaPredicted RBP9.85□□□□□ -0.83
LSM5-201ENST00000223084 RABL2BQ9UNT1 228 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 VSIG4Q9Y279 399 aa9.85□□□□□ -0.83
LSM5-201ENST00000223084 MEGF8Q7Z7M0 2845 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 HMX3A6NHT5 357 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 E7EUB6 86 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 I3L521 148 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 CREBL2O60519 120 aaPredicted RBP9.84□□□□□ -0.83
LSM5-201ENST00000223084 ACTL6BO94805 426 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 IGHV3-11P01762 117 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 TRGV3P03979 118 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 NQO2P16083 231 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 F2RP25116 425 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 SLC6A1P30531 599 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 TAS2R31P59538 309 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 DMBX1Q8NFW5 382 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 OR4C16Q8NGL9 310 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 CD300LFQ8TDQ1 290 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 PLEKHA2Q9HB19 425 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 HRASLSQ9HDD0 168 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 COA4Q9NYJ1 87 aa9.84□□□□□ -0.83
LSM5-201ENST00000223084 A0A1B0GW64 132 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 MPPED1O15442 326 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 PRH1P02810 166 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 IL6RP08887 468 aaPredicted RBP9.83□□□□□ -0.84
LSM5-201ENST00000223084 CD40LGP29965 261 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 S100A5P33763 92 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 G6PCP35575 357 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 RPL27AP46776 148 aaKnown RBP9.83□□□□□ -0.84
LSM5-201ENST00000223084 RPL8P62917 257 aaKnown RBP9.83□□□□□ -0.84
LSM5-201ENST00000223084 PYDC2Q56P42 97 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 ADAD2Q8NCV1 583 aaKnown RBP9.83□□□□□ -0.84
LSM5-201ENST00000223084 OR11H1Q8NG94 326 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 OR4A5Q8NH83 315 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 TERB2Q8NHR7 220 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 MARCH1Q8TCQ1 289 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 MRGPRFQ96AM1 343 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 TMEM68Q96MH6 324 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 FYTTD1Q96QD9 318 aaKnown RBP9.83□□□□□ -0.84
LSM5-201ENST00000223084 SLC2A9Q9NRM0 540 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 TMEM140Q9NV12 185 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 BET1LQ9NYM9 111 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 COMMD9Q9P000 198 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 V9GYH0 126 aa9.83□□□□□ -0.84
LSM5-201ENST00000223084 ANKRD20A5PA0PJZ0 165 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 DISC1C4P0D8 188 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 TEX22C9J3V5 150 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 UPK2O00526 184 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 RBMXL2O75526 392 aaKnown RBP9.82□□□□□ -0.84
LSM5-201ENST00000223084 KRASP01116 189 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 PRB2P02812 416 aaPredicted RBP9.82□□□□□ -0.84
LSM5-201ENST00000223084 OR9G9P0C7N8 305 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 AKAIN1P0CW23 69 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 HLA-GP17693 338 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 S100GP29377 79 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 MAS1LP35410 378 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms