RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 F6UZH7 168 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 CD40P25942 277 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 S100A2P29034 98 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 ATP5IP56385 69 aaPredicted RBP17.35■□□□□ 0.37
CCDC130-201ENST00000221554 RPL23P62829 140 aaKnown RBP17.35■□□□□ 0.37
CCDC130-201ENST00000221554 CT45A1Q5HYN5 189 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 TGIF2LYQ8IUE0 185 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 Q8N7P7 452 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 OR10A7Q8NGE5 316 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 CT45A3Q8NHU0 189 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 NPVFQ9HCQ7 196 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 ZZEF1O43149 2961 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 ATXN7O15265 892 aaPredicted RBP17.35■□□□□ 0.37
CCDC130-201ENST00000221554 PAGE4O60829 102 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 HSPE1P61604 102 aaKnown RBP17.35■□□□□ 0.37
CCDC130-201ENST00000221554 MRPS11P82912 194 aaKnown RBP17.35■□□□□ 0.37
CCDC130-201ENST00000221554 RAB31Q13636 194 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 TEX36Q5VZQ5 186 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 TMEM108Q6UXF1 575 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 ZNF788Q6ZQV5 615 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 RPUSD4Q96CM3 377 aaKnown RBP17.35■□□□□ 0.37
CCDC130-201ENST00000221554 PYGO2Q9BRQ0 406 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 LOC400499M0QZD8 3231 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 USF3Q68DE3 2245 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 PRSS46E5RG02 174 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BKO60814 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 TRGC2P03986 189 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BJP06899 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 TNFRSF1AP19438 455 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BOP23527 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BBP33778 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BDP58876 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 B2MP61769 119 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BCP62807 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 CTAG1AP78358 180 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HNF4GQ14541 408 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST2H2BEQ16778 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 SPRNQ5BIV9 151 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.34■□□□□ 0.37
CCDC130-201ENST00000221554 TREML4Q6UXN2 200 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 SLC16A13Q7RTY0 426 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BHQ93079 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 BTF3L4Q96K17 158 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BNQ99877 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 HIST1H2BMQ99879 126 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 OR51M1Q9H341 326 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 SRD5A3Q9H8P0 318 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 NIT2Q9NQR4 276 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 TMEM14BQ9NUH8 114 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 GAR1Q9NY12 217 aaKnown RBP17.34■□□□□ 0.37
CCDC130-201ENST00000221554 URB1O60287 2271 aaKnown RBP17.34■□□□□ 0.37
CCDC130-201ENST00000221554 CACNA1DQ01668 2161 aa17.34■□□□□ 0.37
CCDC130-201ENST00000221554 C11orf94C9JXX5 98 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 H7BYZ3 331 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 HMGB3O15347 200 aaKnown RBP17.33■□□□□ 0.37
CCDC130-201ENST00000221554 NCMAPQ5T1S8 102 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 ZNF439Q8NDP4 499 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 PLPPR2Q96GM1 343 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 RHOVQ96L33 236 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 GAFA1Q96PS6 74 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 PRNDQ9UKY0 176 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 ACACBO00763 2458 aa17.33■□□□□ 0.37
CCDC130-201ENST00000221554 SAA2-SAA4A0A096LPE2 208 aa17.33■□□□□ 0.36
CCDC130-201ENST00000221554 hADV38S2A0JD32 116 aa17.33■□□□□ 0.36
CCDC130-201ENST00000221554 PPP1R2P9O14990 202 aa17.33■□□□□ 0.36
CCDC130-201ENST00000221554 PFN1P07737 140 aaKnown RBP17.33■□□□□ 0.36
CCDC130-201ENST00000221554 SAA2P0DJI9 122 aaPredicted RBP17.33■□□□□ 0.36
CCDC130-201ENST00000221554 RPS16P62249 146 aaKnown RBP17.33■□□□□ 0.36
CCDC130-201ENST00000221554 RPRMLQ8N4K4 120 aa17.33■□□□□ 0.36
CCDC130-201ENST00000221554 ZNF257Q9Y2Q1 563 aa17.33■□□□□ 0.36
CCDC130-201ENST00000221554 MKRN2OSH3BPM6 223 aa17.32■□□□□ 0.36
CCDC130-201ENST00000221554 RRHO14718 337 aa17.32■□□□□ 0.36
CCDC130-201ENST00000221554 SLC31A2O15432 143 aa17.32■□□□□ 0.36
CCDC130-201ENST00000221554 CXorf1O96002 111 aa17.32■□□□□ 0.36
CCDC130-201ENST00000221554 CD99P14209 185 aa17.32■□□□□ 0.36
CCDC130-201ENST00000221554 C16orf82Q7Z2V1 217 aa17.32■□□□□ 0.36
CCDC130-201ENST00000221554 DSPP15924 2871 aaKnown RBP17.32■□□□□ 0.36
CCDC130-201ENST00000221554 NKX6-3A6NJ46 265 aa17.31■□□□□ 0.36
CCDC130-201ENST00000221554 SRP14P37108 136 aaKnown RBP17.31■□□□□ 0.36
CCDC130-201ENST00000221554 MEF2CQ06413 473 aaPredicted RBP17.31■□□□□ 0.36
CCDC130-201ENST00000221554 FAM27E3Q08E93 113 aa17.31■□□□□ 0.36
CCDC130-201ENST00000221554 OR4A47Q6IF82 309 aa17.31■□□□□ 0.36
CCDC130-201ENST00000221554 CISD2Q8N5K1 135 aaKnown RBP17.31■□□□□ 0.36
CCDC130-201ENST00000221554 TMEM204Q9BSN7 226 aa17.31■□□□□ 0.36
CCDC130-201ENST00000221554 FKBP11Q9NYL4 201 aa17.31■□□□□ 0.36
CCDC130-201ENST00000221554 PXMP4Q9Y6I8 212 aa17.31■□□□□ 0.36
CCDC130-201ENST00000221554 MAP1BP46821 2468 aaKnown RBP17.31■□□□□ 0.36
CCDC130-201ENST00000221554 PRRG2O14669 202 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 TMPRSS2O15393 492 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 KLK10O43240 276 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 GYPAP02724 150 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 FABP1P07148 127 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 NPY1RP25929 384 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 GALR1P47211 349 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 RTL8BQ17RB0 113 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 VKORC1L1Q8N0U8 176 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 LYG1Q8N1E2 194 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 SLC24A4Q8NFF2 622 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 GGTLC1Q9BX51 225 aa17.3■□□□□ 0.36
CCDC130-201ENST00000221554 MS4A5Q9H3V2 200 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms