RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 C11orf42Q8N5U0 333 aa12.39□□□□□ -0.43
PAF1-201ENST00000221265 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
PAF1-201ENST00000221265 NEIL1Q96FI4 390 aaPredicted RBP12.39□□□□□ -0.43
PAF1-201ENST00000221265 CCL19Q99731 98 aa12.39□□□□□ -0.43
PAF1-201ENST00000221265 RSG1Q9BU20 258 aa12.39□□□□□ -0.43
PAF1-201ENST00000221265 COA4Q9NYJ1 87 aa12.39□□□□□ -0.43
PAF1-201ENST00000221265 MIOXQ9UGB7 285 aa12.39□□□□□ -0.43
PAF1-201ENST00000221265 CELSR1Q9NYQ6 3014 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 SRP19P09132 144 aaKnown RBP12.38□□□□□ -0.43
PAF1-201ENST00000221265 P0C879 139 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 FOLR2P14207 255 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 PLA2G2AP14555 144 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 COX6B1P14854 86 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 GPR6P46095 362 aaPredicted RBP12.38□□□□□ -0.43
PAF1-201ENST00000221265 GPR12P47775 334 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 UBE2KP61086 200 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
PAF1-201ENST00000221265 SOHLH1Q5JUK2 328 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 OR8B3Q8NGG8 313 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 RBMXL1Q96E39 390 aaKnown RBP12.38□□□□□ -0.43
PAF1-201ENST00000221265 OR8B2Q96RD0 313 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 TUBA4BQ9H853 241 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 RAB9BQ9NP90 201 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 C17orf98A8MV24 154 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 FAM90A26D6RGX4 464 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 G6PCP35575 357 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 ZNF816Q0VGE8 651 aaPredicted RBP12.38□□□□□ -0.43
PAF1-201ENST00000221265 ICAM4Q14773 271 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 SPANXN5Q5MJ07 72 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 ZFP82Q8N141 532 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 SCGB1C1Q8TD33 95 aa12.38□□□□□ -0.43
PAF1-201ENST00000221265 CSMD1Q96PZ7 3565 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 C22orf46C9J442 243 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 SCAF4O95104 1147 aaKnown RBP12.37□□□□□ -0.43
PAF1-201ENST00000221265 KRASP01116 189 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 TNFRSF9Q07011 255 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 RHEBQ15382 184 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 LRRC75BQ2VPJ9 315 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 ZNF506Q5JVG8 444 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 CLDND2Q8NHS1 167 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 RBKSQ9H477 322 aa12.37□□□□□ -0.43
PAF1-201ENST00000221265 PATZ1Q9HBE1 687 aaKnown RBP12.37□□□□□ -0.43
PAF1-201ENST00000221265 TRBV23-1A0A0A0MS06 115 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 S1PR2O95136 353 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 HBE1P02100 147 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 FBP1P09467 338 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 MSMO1Q15800 293 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 TCTEX1D2Q8WW35 142 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 RPRMQ9NS64 109 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 HSPB7Q9UBY9 170 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 PUS1Q9Y606 427 aaKnown RBP eCLIP12.36□□□□□ -0.43
PAF1-201ENST00000221265 SAA2-SAA4A0A096LPE2 208 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 TRAV1-1A0A0B4J248 108 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 M0R1X1 148 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 OR8U8P0C7N1 319 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 SAA2P0DJI9 122 aaPredicted RBP12.36□□□□□ -0.43
PAF1-201ENST00000221265 HBG1P69891 147 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 HBG2P69892 147 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 CATR1Q13166 79 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 HABP2Q14520 560 aaPredicted RBP12.36□□□□□ -0.43
PAF1-201ENST00000221265 NCR3LG1Q68D85 454 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 LYG1Q8N1E2 194 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 OR4C12Q96R67 309 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 BPESC1Q9GZL8 116 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 BIN3Q9NQY0 253 aa12.36□□□□□ -0.43
PAF1-201ENST00000221265 PPIAL4CA0A0B4J2A2 164 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 A0A1W2PPH5 198 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 ITGB1BP1O14713 200 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 MT-ND4LP03901 98 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 HSPB1P04792 205 aaKnown RBP12.35□□□□□ -0.43
PAF1-201ENST00000221265 PPIAL4GP0DN37 164 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
PAF1-201ENST00000221265 GNB2P62879 340 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 SLC25A48Q6ZT89 311 aaKnown RBP12.35□□□□□ -0.43
PAF1-201ENST00000221265 LINC00518Q8N0U6 118 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 LILRB2Q8N423 598 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 PSMG3Q9BT73 122 aaPredicted RBP12.35□□□□□ -0.43
PAF1-201ENST00000221265 NAV2Q8IVL1 2488 aa12.35□□□□□ -0.43
PAF1-201ENST00000221265 A0A1W2PPE2 198 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 ARG1P05089 322 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 IGHV1-8P0DP01 117 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 RAB7AP51149 207 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 RAB2AP61019 212 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 ZNF726P1Q15940 193 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 RNF212Q495C1 297 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 OR10A7Q8NGE5 316 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 WDR61Q9GZS3 305 aaKnown RBP12.34□□□□□ -0.43
PAF1-201ENST00000221265 SLC38A11Q08AI6 406 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 ZNF66Q6ZN08 573 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 MBD3L1Q8WWY6 194 aa12.34□□□□□ -0.43
PAF1-201ENST00000221265 HSD17B10Q99714 261 aaKnown RBP12.34□□□□□ -0.43
PAF1-201ENST00000221265 SSBP3Q9BWW4 388 aaPredicted RBP12.34□□□□□ -0.43
PAF1-201ENST00000221265 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
PAF1-201ENST00000221265 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms