RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 PATZ1Q9HBE1 687 aaKnown RBP11.01□□□□□ -0.65
SRP54-201ENST00000216774 LSM4Q9Y4Z0 139 aaKnown RBP11.01□□□□□ -0.65
SRP54-201ENST00000216774 COL6A3P12111 3177 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 A8MWP6 167 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 ITGB1BP1O14713 200 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 EGR1P18146 543 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 TRIP6Q15654 476 aaKnown RBP11.01□□□□□ -0.65
SRP54-201ENST00000216774 GBGT1Q8N5D6 347 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 OR2Z1Q8NG97 314 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 SARAFQ96BY9 339 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 MEGF10Q96KG7 1140 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 TMEM204Q9BSN7 226 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 TMEM140Q9NV12 185 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 DUSP13Q9UII6 198 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 DOCK11Q5JSL3 2073 aa11.01□□□□□ -0.65
SRP54-201ENST00000216774 A0A0U1RQK1 487 aa11□□□□□ -0.65
SRP54-201ENST00000216774 ZNF320A2RRD8 509 aa11□□□□□ -0.65
SRP54-201ENST00000216774 RAB7AP51149 207 aa11□□□□□ -0.65
SRP54-201ENST00000216774 SSTP61278 116 aa11□□□□□ -0.65
SRP54-201ENST00000216774 RPL39P5Q59GN2 51 aa11□□□□□ -0.65
SRP54-201ENST00000216774 UNQ6494/PRO21346Q6UXR6 183 aa11□□□□□ -0.65
SRP54-201ENST00000216774 OR4S2Q8NH73 311 aa11□□□□□ -0.65
SRP54-201ENST00000216774 DDB2Q92466 427 aa11□□□□□ -0.65
SRP54-201ENST00000216774 NCOR1P1Q9H4R4 102 aa11□□□□□ -0.65
SRP54-201ENST00000216774 NPVFQ9HCQ7 196 aa11□□□□□ -0.65
SRP54-201ENST00000216774 TCF19Q9Y242 345 aa11□□□□□ -0.65
SRP54-201ENST00000216774 TRAPPC1Q9Y5R8 145 aa11□□□□□ -0.65
SRP54-201ENST00000216774 MDFIC2A0A1B0GVS7 189 aa11□□□□□ -0.65
SRP54-201ENST00000216774 C1QTNF9P0C862 333 aa11□□□□□ -0.65
SRP54-201ENST00000216774 MIC13Q5XKP0 118 aa11□□□□□ -0.65
SRP54-201ENST00000216774 VKORC1L1Q8N0U8 176 aa11□□□□□ -0.65
SRP54-201ENST00000216774 ZNF664Q8N3J9 261 aa11□□□□□ -0.65
SRP54-201ENST00000216774 ZNF114Q8NC26 417 aa11□□□□□ -0.65
SRP54-201ENST00000216774 RAB9BQ9NP90 201 aa11□□□□□ -0.65
SRP54-201ENST00000216774 ELOVL5Q9NYP7 299 aa11□□□□□ -0.65
SRP54-201ENST00000216774 TRBV20OR9-2A0A075B6H5 130 aa10.99□□□□□ -0.65
SRP54-201ENST00000216774 C15orf61A6NNL5 157 aa10.99□□□□□ -0.65
SRP54-201ENST00000216774 BMP5P22003 454 aa10.99□□□□□ -0.65
SRP54-201ENST00000216774 ZNF134P52741 427 aa10.99□□□□□ -0.65
SRP54-201ENST00000216774 IGFL2Q6UWQ7 119 aa10.99□□□□□ -0.65
SRP54-201ENST00000216774 ABHD12Q8N2K0 398 aa10.99□□□□□ -0.65
SRP54-201ENST00000216774 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.99□□□□□ -0.65
SRP54-201ENST00000216774 SGMS2Q8NHU3 365 aa10.99□□□□□ -0.65
SRP54-201ENST00000216774 ZNF71Q9NQZ8 489 aaPredicted RBP10.99□□□□□ -0.65
SRP54-201ENST00000216774 CACNA1DQ01668 2161 aa10.99□□□□□ -0.65
SRP54-201ENST00000216774 IQCJQ1A5X6 159 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 MRPL41Q8IXM3 137 aaKnown RBP10.98□□□□□ -0.65
SRP54-201ENST00000216774 BEND2Q8NDZ0 799 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 SDSLQ96GA7 329 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 PLPPR2Q96GM1 343 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 FAM234AQ9H0X4 552 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 AURKAIP1Q9NWT8 199 aaPredicted RBP10.98□□□□□ -0.65
SRP54-201ENST00000216774 CALYQ9NYX4 217 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 FOXA2Q9Y261 457 aaPredicted RBP10.98□□□□□ -0.65
SRP54-201ENST00000216774 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 TRAV3A0A0B4J244 114 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 TRAV17A0A0B4J275 112 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 ZNF705GA8MUZ8 300 aaPredicted RBP10.98□□□□□ -0.65
SRP54-201ENST00000216774 MT-CO2P00403 227 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 IL6RP08887 468 aaPredicted RBP10.98□□□□□ -0.65
SRP54-201ENST00000216774 GCHFRP30047 84 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 TIMP3P35625 211 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 CCL11P51671 97 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 YPEL3P61236 119 aaPredicted RBP10.98□□□□□ -0.65
SRP54-201ENST00000216774 RHOBP62745 196 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 RAB31Q13636 194 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 PRSS8Q16651 343 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 TEPPQ6URK8 271 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 BHLHA15Q7RTS1 189 aaPredicted RBP10.98□□□□□ -0.65
SRP54-201ENST00000216774 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 FDCSPQ8NFU4 85 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 C1orf159Q96HA4 380 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 NDUFAF3Q9BU61 184 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 OPN3Q9H1Y3 402 aaPredicted RBP10.98□□□□□ -0.65
SRP54-201ENST00000216774 TMEM14BQ9NUH8 114 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 PROCRQ9UNN8 238 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 KNTC1P50748 2209 aa10.98□□□□□ -0.65
SRP54-201ENST00000216774 SCO2A0A1W2PP80 73 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 AHRRA9YTQ3 701 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 FNDC10F2Z333 226 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 SLC31A2O15432 143 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 TNFSF13O75888 250 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 CGB3P0DN86 165 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 CGB7P0DN87 165 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 DEFB123Q8N688 67 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 C11orf52Q96A22 123 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 C2orf88Q9BSF0 95 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 SLC25A15Q9Y619 301 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 LY96Q9Y6Y9 160 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 CACNA1GO43497 2377 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 GPR179Q6PRD1 2367 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 PGPEP1LA6NFU8 196 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 M0R296 226 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 CGAP01215 116 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 NPY1RP25929 384 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 RPL29P47914 159 aaKnown RBP10.97□□□□□ -0.65
SRP54-201ENST00000216774 HSPE1P61604 102 aaKnown RBP10.97□□□□□ -0.65
SRP54-201ENST00000216774 EFNB3Q15768 340 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 ARSJQ5FYB0 599 aaPredicted RBP10.97□□□□□ -0.65
SRP54-201ENST00000216774 TEX38Q6PEX7 206 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms