RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 IGKV1-16P04430 117 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 CD5P06127 495 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 VDAC2P45880 294 aaPredicted RBP14.18□□□□□ -0.14
VRK1-201ENST00000216639 RAB13P51153 203 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 RAB11AP62491 216 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 TGIF2LXQ8IUE1 241 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 C11orf42Q8N5U0 333 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 FLYWCH2Q96CP2 140 aaKnown RBP14.18□□□□□ -0.14
VRK1-201ENST00000216639 BET1LQ9NYM9 111 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 ZNF257Q9Y2Q1 563 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 OR51B2Q9Y5P1 312 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 LY6HO94772 140 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 MC5RP33032 325 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 GUK1Q16774 197 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 VWC2Q2TAL6 325 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 TMEM177Q53S58 311 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 SVBPQ8N300 66 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 OR4C13Q8NGP0 309 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 LHX4Q969G2 390 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 ST6GALNAC6Q969X2 333 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 HARBI1Q96MB7 349 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 NABP2Q9BQ15 211 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 SEC11CQ9BY50 192 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 EIF5A2Q9GZV4 153 aaKnown RBP14.18□□□□□ -0.14
VRK1-201ENST00000216639 UBTD1Q9HAC8 227 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 COL6A6A6NMZ7 2263 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 ANKHD1Q8IWZ3 2542 aaKnown RBP14.17□□□□□ -0.14
VRK1-201ENST00000216639 LIPFP07098 398 aa14.17□□□□□ -0.14
VRK1-201ENST00000216639 IL6RP08887 468 aaPredicted RBP14.17□□□□□ -0.14
VRK1-201ENST00000216639 M6PRP20645 277 aa14.17□□□□□ -0.14
VRK1-201ENST00000216639 REG1BP48304 166 aa14.17□□□□□ -0.14
VRK1-201ENST00000216639 VSTM2AQ8TAG5 236 aa14.17□□□□□ -0.14
VRK1-201ENST00000216639 GGACTQ9BVM4 153 aa14.17□□□□□ -0.14
VRK1-201ENST00000216639 CARHSP1Q9Y2V2 147 aaKnown RBP14.17□□□□□ -0.14
VRK1-201ENST00000216639 WASHC3Q9Y3C0 194 aa14.17□□□□□ -0.14
VRK1-201ENST00000216639 ADGRG4Q8IZF6 3080 aa14.17□□□□□ -0.14
VRK1-201ENST00000216639 IGHV2-26A0A0B4J1V2 119 aa14.16□□□□□ -0.14
VRK1-201ENST00000216639 KBTBD11O94819 623 aa14.16□□□□□ -0.14
VRK1-201ENST00000216639 FGF7P21781 194 aa14.16□□□□□ -0.14
VRK1-201ENST00000216639 C10orf91Q5T1B1 145 aa14.16□□□□□ -0.14
VRK1-201ENST00000216639 ETV3LQ6ZN32 361 aa14.16□□□□□ -0.14
VRK1-201ENST00000216639 CENPVQ7Z7K6 275 aaPredicted RBP14.16□□□□□ -0.14
VRK1-201ENST00000216639 CLEC7AQ9BXN2 247 aa14.16□□□□□ -0.14
VRK1-201ENST00000216639 PATZ1Q9HBE1 687 aaKnown RBP14.16□□□□□ -0.14
VRK1-201ENST00000216639 CACNA1AO00555 2505 aa14.16□□□□□ -0.14
VRK1-201ENST00000216639 A0A1B0GW64 132 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 C17orf112F2Z3M2 114 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 SFTA3P0C7M3 94 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 SAA1P0DJI8 122 aaPredicted RBP14.15□□□□□ -0.14
VRK1-201ENST00000216639 RPS16P62249 146 aaKnown RBP14.15□□□□□ -0.14
VRK1-201ENST00000216639 TMEM41BQ5BJD5 291 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 ZNF709Q8N972 641 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 LY6G5BQ8NDX9 201 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 OR5B3Q8NH48 314 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 OR4A5Q8NH83 315 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 SFT2D1Q8WV19 159 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 RBMXL1Q96E39 390 aaKnown RBP14.15□□□□□ -0.14
VRK1-201ENST00000216639 SMDT1Q9H4I9 107 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 PLEKHA3Q9HB20 300 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 AMMECR1Q9Y4X0 333 aaPredicted RBP14.15□□□□□ -0.14
VRK1-201ENST00000216639 CHD8Q9HCK8 2581 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 A0A1W2PPR1 153 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 A6NNC1 897 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 SRRM4A7MD48 611 aaKnown RBP14.15□□□□□ -0.14
VRK1-201ENST00000216639 C19orf84I3L1E1 186 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 ZZEF1O43149 2961 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 F12P00748 615 aaPredicted RBP14.15□□□□□ -0.14
VRK1-201ENST00000216639 MBP02144 154 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 IGFBP2P18065 325 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 ADCYAP1P18509 176 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 HLA-DRB5Q30154 266 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 BEND2Q8NDZ0 799 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 SLC24A4Q8NFF2 622 aa14.15□□□□□ -0.14
VRK1-201ENST00000216639 A0A1B0GV50 99 aa14.14□□□□□ -0.15
VRK1-201ENST00000216639 IFNA4P05014 189 aa14.14□□□□□ -0.15
VRK1-201ENST00000216639 CD1BP29016 333 aa14.14□□□□□ -0.15
VRK1-201ENST00000216639 GPR6P46095 362 aaPredicted RBP14.14□□□□□ -0.15
VRK1-201ENST00000216639 PRCDQ00LT1 54 aa14.14□□□□□ -0.15
VRK1-201ENST00000216639 HINT2Q9BX68 163 aa14.14□□□□□ -0.15
VRK1-201ENST00000216639 MS4A7Q9GZW8 240 aaPredicted RBP14.14□□□□□ -0.15
VRK1-201ENST00000216639 RPRMQ9NS64 109 aa14.14□□□□□ -0.15
VRK1-201ENST00000216639 KIAA1456Q9P272 454 aa14.14□□□□□ -0.15
VRK1-201ENST00000216639 ONECUT1Q9UBC0 465 aa14.14□□□□□ -0.15
VRK1-201ENST00000216639 TRAV1-1A0A0B4J248 108 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 GOSR1O95249 250 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 IGLV1-47P01700 117 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 USF1P22415 310 aaPredicted RBP14.13□□□□□ -0.15
VRK1-201ENST00000216639 NPY1RP25929 384 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 CDKN1AP38936 164 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 ATP5IP56385 69 aaPredicted RBP14.13□□□□□ -0.15
VRK1-201ENST00000216639 DLK1P80370 383 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 SPSB3Q6PJ21 355 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 SUN5Q8TC36 379 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 SSBP3Q9BWW4 388 aaPredicted RBP14.13□□□□□ -0.15
VRK1-201ENST00000216639 NKX6-2Q9C056 277 aaPredicted RBP14.13□□□□□ -0.15
VRK1-201ENST00000216639 KPTNQ9Y664 436 aa14.13□□□□□ -0.15
VRK1-201ENST00000216639 RRHO14718 337 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 SOX15O60248 233 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 MPDU1O75352 247 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 SNAPINO95295 136 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms