RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 A6NNC1 897 aa11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 IGKV1-16P04430 117 aa11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 MDKP21741 143 aaPredicted RBP11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 OR8G2PQ6IF36 304 aa11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 TAF15Q92804 592 aaKnown RBP eCLIP11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 NARS2Q96I59 477 aaKnown RBP11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 GGACTQ9BVM4 153 aa11.65□□□□□ -0.54
RTFDC1-201ENST00000023939 YLPM1P49750 1951 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 PPIAL4CA0A0B4J2A2 164 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 SRRM4A7MD48 611 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 C19orf84I3L1E1 186 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 PPIAL4GP0DN37 164 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 M6PRP20645 277 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 TLE4Q04727 773 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 BEND2Q8NDZ0 799 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 PATZ1Q9HBE1 687 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 TREM1Q9NP99 234 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 FKBP11Q9NYL4 201 aa11.64□□□□□ -0.55
RTFDC1-201ENST00000023939 hCG_1809904A0A1W2PP81 198 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 A0A1W2PPE2 198 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 A0A1W2PR64 198 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 A0A1W2PRV1 198 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 FAM157AC9JC47 383 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 MC5RP33032 325 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 RAB13P51153 203 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 PRRX1P54821 245 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 SPINK9Q5DT21 86 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 SPSB3Q6PJ21 355 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 OR4A5Q8NH83 315 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 LHX4Q969G2 390 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 RSG1Q9BU20 258 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 SMDT1Q9H4I9 107 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 FBXO7Q9Y3I1 522 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 USP24Q9UPU5 2620 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 ABCA4P78363 2273 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 IGHV2-26A0A0B4J1V2 119 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 UBE2L5PA0A1B0GUS4 154 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 AGPAT2O15120 278 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 LY6HO94772 140 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 KBTBD11O94819 623 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 F12P00748 615 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 HBE1P02100 147 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 APOC3P02656 99 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 LIPFP07098 398 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 H2AFB1P0C5Y9 115 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 ADCYAP1P18509 176 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 ATP5IP56385 69 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 AKR1C1Q04828 323 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 PEA15Q15121 130 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 HLA-DRB5Q30154 266 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 TGIF2LXQ8IUE1 241 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 OR4C13Q8NGP0 309 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 OR5B3Q8NH48 314 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 PBDC1Q9BVG4 233 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 CLEC7AQ9BXN2 247 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 WASHC3Q9Y3C0 194 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 FAM96BQ9Y3D0 163 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 OR51B2Q9Y5P1 312 aa11.63□□□□□ -0.55
RTFDC1-201ENST00000023939 ADGRG4Q8IZF6 3080 aa11.62□□□□□ -0.55
RTFDC1-201ENST00000023939 PRSS46E5RG02 174 aa11.62□□□□□ -0.55
RTFDC1-201ENST00000023939 SCO1O75880 301 aa11.62□□□□□ -0.55
RTFDC1-201ENST00000023939 SAA1P0DJI8 122 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-201ENST00000023939 PRCDQ00LT1 54 aa11.62□□□□□ -0.55
RTFDC1-201ENST00000023939 VSTM2AQ8TAG5 236 aa11.62□□□□□ -0.55
RTFDC1-201ENST00000023939 MBD3L1Q8WWY6 194 aa11.62□□□□□ -0.55
RTFDC1-201ENST00000023939 C22orf46C9J442 243 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 H7C2Y5 167 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 SOX15O60248 233 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 IFNA10P01566 189 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 HOXA1P49639 335 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 EFNA4P52798 201 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 DLK1P80370 383 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 GUK1Q16774 197 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 SVBPQ8N300 66 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 TMEM167AQ8TBQ9 72 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 TMEM170AQ8WVE7 144 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 HARBI1Q96MB7 349 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 TMEM231Q9H6L2 316 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 RPRMQ9NS64 109 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 KIAA1456Q9P272 454 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 WDR83OSQ9Y284 106 aa11.61□□□□□ -0.55
RTFDC1-201ENST00000023939 F8W036 122 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 M0R1W7 72 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 REG1BP48304 166 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 RAB2AP61019 212 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 RAB11AP62491 216 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 DIAPH2-AS1Q14236 149 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 TMEM41BQ5BJD5 291 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 ETV3LQ6ZN32 361 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 RBMXL1Q96E39 390 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 UBTD1Q9HAC8 227 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 ENY2Q9NPA8 101 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 AMMECR1Q9Y4X0 333 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 ITPR1Q14643 2758 aa11.6□□□□□ -0.55
RTFDC1-201ENST00000023939 C9JQL5 133 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms