RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 RCC1LQ96I51 464 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-201ENST00000011898 OR2V2Q96R30 315 aa10.37□□□□□ -0.75
TSPAN9-201ENST00000011898 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
TSPAN9-201ENST00000011898 SLC25A5P05141 298 aaKnown RBP10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 CYC1P08574 325 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 FTH1P19P0C7X4 201 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 STAG3L3P0CL85 134 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 RPL7P18124 248 aaKnown RBP10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 BTF3P20290 206 aaKnown RBP10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 ORAOV1Q8WV07 137 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 COMMD5Q9GZQ3 224 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 CST9LQ9H4G1 147 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 DECR2Q9NUI1 292 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 JKAMPQ9P055 326 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 TRBV24-1A0A075B6N3 115 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 GAGE12BA1L429 117 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 TMEM250H0YL14 139 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 PCOLCEQ15113 449 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 UNQ6494/PRO21346Q6UXR6 183 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 PAQR4Q8N4S7 273 aaPredicted RBP10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 OR2M7Q8NG81 312 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 TMEM70Q9BUB7 260 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 PMELP40967 661 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 ICAM4Q14773 271 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 KCNS1Q96KK3 526 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 TMEM56Q96MV1 263 aa10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 MRPL13Q9BYD1 178 aaKnown RBP10.36□□□□□ -0.75
TSPAN9-201ENST00000011898 SPRY3O43610 288 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 FGF12P61328 243 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 NKX6-3A6NJ46 265 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 ZNF735P0CB33 412 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 UBE2L3P68036 154 aaKnown RBP10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 CEACAM21Q3KPI0 293 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 PLA2G2CQ5R387 149 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 ZNF841Q6ZN19 808 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 FAM169BQ8N8A8 192 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 SFRP2Q96HF1 295 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 NGBQ9NPG2 151 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 CDH23Q9H251 3354 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 SLC17A3O00476 420 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 MPZP25189 248 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 PLAURQ03405 335 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 C10orf128Q5T292 105 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 CLDND2Q8NHS1 167 aa10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 TAF15Q92804 592 aaKnown RBP eCLIP10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 CHCHD2Q9Y6H1 151 aaPredicted RBP10.35□□□□□ -0.75
TSPAN9-201ENST00000011898 PCNX1Q96RV3 2341 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 TRAV30A0A087WSZ9 112 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 TRAV17A0A0B4J275 112 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 C7orf71A4D174 169 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 IL3RAP26951 378 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 OR4S2Q8NH73 311 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 ANAPC13Q9BS18 74 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 SRXN1Q9BYN0 137 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 HES4Q9HCC6 221 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 CYTL1Q9NRR1 136 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 ZNF319Q9P2F9 582 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 DOCK11Q5JSL3 2073 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 ADH4P08319 380 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 CEACAM8P31997 349 aaPredicted RBP10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 RPL23P62829 140 aaKnown RBP10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 FHL1Q13642 323 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 DNLZQ5SXM8 178 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 TMEM136Q6ZRR5 245 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 OR10AG1Q8NH19 301 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 BOD1Q96IK1 185 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 HSD17B10Q99714 261 aaKnown RBP10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 RTBDNQ9BSG5 229 aaPredicted RBP10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 ODAMA1E959 279 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 EMP1P54849 157 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 FOXA3P55318 350 aaPredicted RBP10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 IZUMO4Q1ZYL8 232 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 LRRC29Q8WV35 223 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 EGLN1Q9GZT9 426 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 SH2D2AQ9NP31 389 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 IGSF23A1L1A6 192 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 LINC00869P0C866 280 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 IGFBP7Q16270 282 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 FBXW9Q5XUX1 488 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 ASPHD2Q6ICH7 369 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 ZNF837Q96EG3 531 aaPredicted RBP10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 NEU1Q99519 415 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 ATP23Q9Y6H3 246 aa10.34□□□□□ -0.75
TSPAN9-201ENST00000011898 LRP4O75096 1905 aa10.33□□□□□ -0.75
TSPAN9-201ENST00000011898 EML5Q05BV3 1969 aa10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 PTPN13Q12923 2485 aa10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 SYNGR1O43759 233 aa10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 COX6A1P12074 109 aa10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 CEBPDP49716 269 aaPredicted RBP10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 IBA57Q5T440 356 aaKnown RBP10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 CALHM1Q8IU99 346 aa10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 NFAM1Q8NET5 270 aaPredicted RBP10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 BARX1Q9HBU1 254 aaPredicted RBP10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 TMEM167BQ9NRX6 74 aa10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 C5orf42Q9H799 3197 aa10.33□□□□□ -0.76
TSPAN9-201ENST00000011898 TRGV10A0A0A0MS01 117 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms