RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Nupl2Q8CIC2 420 aaKnown RBP10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Fcrl1Q8R4Y0 343 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1446Q8VFX4 308 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Scgb1b27Q91WB5 92 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Ms4a6bQ99N09 244 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Rcc1lQ9CYF5 461 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Wdr20Q9D5R2 567 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr465-ps1A0A0U1RPZ4 315 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Sult2a3D3Z1W5 285 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Meox1P32442 253 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Q8CDS7 251 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Flywch2Q9CQE9 139 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Asb5Q9D1A4 329 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Trav5-4A0A075B652 114 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Lrrc29A0A1B0GQY9 621 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm14597A2CFG5 200 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Esp34G3UXG0 151 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tpsb2P21845 276 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 CapgP24452 352 aaKnown RBP10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Sf3b6P59708 125 aaKnown RBP10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Nanos2P60322 136 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Q0VG62 139 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 EcscrQ3TZW0 214 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr132Q7TRI8 313 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Hif1anQ8BLR9 349 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr790Q8VGJ3 322 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1038Q8VGS1 319 aa10.29□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm13083A2AGW5 501 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Adam10O35598 749 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Mfsd4b3Q3UN21 355 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1031Q7TR87 336 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Dmrta1Q8CFG4 490 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Vmn1r211Q8R266 298 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Klf7Q99JB0 301 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr661Q99NH4 319 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Wnt16Q9QYS1 364 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr157Q9QZ20 318 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Myo10F8VQB6 2062 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Birc7A2AWP0 285 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Cmc2Q8K199 79 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1412Q8VET3 321 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 ShpkQ9D5J6 476 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm3550W4VSN7 160 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Zfp976E9Q981 636 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Pwwp2bE9Q9M8 600 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 GzmfP08883 248 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Efnb2P52800 336 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Ca10P61215 328 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 DbpQ60925 325 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Prdx2Q61171 198 aaKnown RBP10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Zfp948Q6DFU8 667 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Sys1Q78S06 156 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tmem11Q8BK08 190 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Slc6a8Q8VBW1 640 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 SdhcQ9CZB0 169 aaKnown RBP10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Mpped2Q9CZJ0 294 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Isg20Q9JL16 300 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm13762A2ATG2 311 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr914E9PW59 316 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 P06344 263 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Cd5P13379 494 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 PpicP30412 212 aaKnown RBP10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1386Q7TQT0 309 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1357Q7TQU7 313 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Prss33Q80WM7 277 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tmem106bQ80X71 275 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 AtcayQ8BHE3 372 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm42517A0A1Y7VLQ2 374 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Cldn20G5E8X0 219 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Gm26965M0QWH4 86 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Mef2bO55087 349 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Wipi1Q8R3E3 446 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Pla2g16Q8R3U1 162 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Ube2v2Q9D2M8 145 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Dll4Q9JI71 686 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Prss1Q9Z1R9 246 aa10.28□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Rab33bO35963 229 aa10.27□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Lyl1P27792 278 aa10.27□□□□□ -0.76
Pcif1-201ENSMUST00000041643 PilraQ2YFS3 302 aa10.27□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Ankrd46Q8BTZ5 228 aa10.27□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Prss35Q8C0F9 409 aa10.27□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Olfr1242Q8VGM6 306 aa10.27□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Rab32Q9CZE3 223 aa10.27□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Hsd17b6Q9R092 317 aa10.27□□□□□ -0.76
Pcif1-201ENSMUST00000041643 Tcstv1O70619 171 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Fgf12P61329 243 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tagln2Q9WVA4 199 aaKnown RBP10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Igkv9-124A0A0G2JDR3 117 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Igkv6-14A0A140T8P1 115 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Fcrl6A1YIY0 268 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 HhexP43120 271 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tbx6P70327 436 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr924Q7TRB8 308 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 BivmQ8CBX9 502 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cox20Q9D7J4 117 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Scp2d1Q9DAH1 156 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr926Q9EQ98 308 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1329L7MTV4 313 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 CebpbP28033 296 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Rps10P63325 165 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms