RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 ZNF716A6NP11 495 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 FAM166BA8MTA8 275 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 PRRX1P54821 245 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 OR1L1Q8NH94 360 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 SVIPQ8NHG7 77 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 PRRG4Q9BZD6 226 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 GJE1A6NN92 205 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 P04436 131 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF808Q8N4W9 903 aaPredicted RBP13.2□□□□□ -0.3
LINC02228-204ENST00000642115 OR4F17Q8NGA8 305 aa13.2□□□□□ -0.3
LINC02228-204ENST00000642115 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 OR5B21A6NL26 309 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 TNRC18O15417 2968 aaPredicted RBP13.19□□□□□ -0.3
LINC02228-204ENST00000642115 PDE6DO43924 150 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 SPINK4O60575 86 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 MRPL33O75394 65 aaKnown RBP13.19□□□□□ -0.3
LINC02228-204ENST00000642115 RHBDL1O75783 438 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 CTXN2P0C2S0 81 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 CCL4P13236 92 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 COX5AP20674 150 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF816Q0VGE8 651 aaPredicted RBP13.19□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF324BQ6AW86 544 aaPredicted RBP13.19□□□□□ -0.3
LINC02228-204ENST00000642115 FAM53AQ6NSI3 398 aaPredicted RBP13.19□□□□□ -0.3
LINC02228-204ENST00000642115 NIT1Q86X76 327 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 BCL2L2Q92843 193 aaPredicted RBP13.19□□□□□ -0.3
LINC02228-204ENST00000642115 APOBEC3DQ96AK3 386 aaPredicted RBP13.19□□□□□ -0.3
LINC02228-204ENST00000642115 TP73-AS1Q9UF72 201 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 TRAPPC2LQ9UL33 140 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 KNTC1P50748 2209 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 ODAMA1E959 279 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 GDF1P27539 372 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 RHOGP84095 191 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 ST6GALNAC3Q8NDV1 305 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF596Q8TC21 504 aa13.19□□□□□ -0.3
LINC02228-204ENST00000642115 PRSS47A8MTI9 375 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 OTX2P32243 289 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 GCSAMLQ5JQS6 135 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 C1orf185Q5T7R7 199 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 MRPL14Q6P1L8 145 aaKnown RBP13.18□□□□□ -0.3
LINC02228-204ENST00000642115 IL36BQ9NZH7 164 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 GTF3C1Q12789 2109 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 TRAV24A0A0B4J272 114 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF891A8MT65 544 aaPredicted RBP13.18□□□□□ -0.3
LINC02228-204ENST00000642115 HSBP1L1C9JCN9 74 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 PSG7Q13046 419 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 TMEM14EPQ6UXP3 125 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 SF3B5Q9BWJ5 86 aaKnown RBP13.18□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF391Q9UJN7 358 aa13.18□□□□□ -0.3
LINC02228-204ENST00000642115 DEGS1O15121 323 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 COX6A1P12074 109 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
LINC02228-204ENST00000642115 RIPPLY3P57055 190 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 GGNQ86UU5 652 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 QTRT1Q9BXR0 403 aaKnown RBP13.17□□□□□ -0.3
LINC02228-204ENST00000642115 CA6P23280 308 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 G6PCP35575 357 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 CDC34P49427 236 aaPredicted RBP13.17□□□□□ -0.3
LINC02228-204ENST00000642115 LGALS4P56470 323 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 RELBQ01201 579 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 CEACAM21Q3KPI0 293 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 OR4A47Q6IF82 309 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 C1QTNF5Q9BXJ0 243 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 CLEC7AQ9BXN2 247 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 TRAV38-1A0A0B4J264 116 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF324O75467 553 aaPredicted RBP13.17□□□□□ -0.3
LINC02228-204ENST00000642115 CA2P00918 260 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 NTF3P20783 257 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 Q6ZS49 121 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 FGFRL1Q8N441 504 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 LSM10Q969L4 123 aaKnown RBP13.17□□□□□ -0.3
LINC02228-204ENST00000642115 GMPPAQ96IJ6 420 aaPredicted RBP13.17□□□□□ -0.3
LINC02228-204ENST00000642115 DLL3Q9NYJ7 618 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 NAT8BQ9UHF3 227 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 CDC42EP3Q9UKI2 254 aa13.17□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF503-AS2A6NEH8 195 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 RAB30Q15771 203 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 ZNF585BQ52M93 769 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 FAM58AQ8N1B3 248 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 MUC15Q8N387 334 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 IMMP1LQ96LU5 166 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 NPCDR1Q9BY65 106 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 SCO2A0A1W2PP80 73 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 OR2T8A6NH00 312 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 RNF212BA8MTL3 300 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 K7EN84 100 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 B3GALT5-AS1P59052 145 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 TRIP6Q15654 476 aaKnown RBP13.16□□□□□ -0.3
LINC02228-204ENST00000642115 STUMQ69YW2 141 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 KCNIP2Q9NS61 270 aa13.16□□□□□ -0.3
LINC02228-204ENST00000642115 RAMP3O60896 148 aa13.15□□□□□ -0.3
LINC02228-204ENST00000642115 SRFP11831 508 aa13.15□□□□□ -0.3
LINC02228-204ENST00000642115 LINC00205P59089 165 aa13.15□□□□□ -0.3
LINC02228-204ENST00000642115 ARG2P78540 354 aa13.15□□□□□ -0.3
LINC02228-204ENST00000642115 HOXA4Q00056 320 aaPredicted RBP13.15□□□□□ -0.3
LINC02228-204ENST00000642115 OR5B3Q8NH48 314 aa13.15□□□□□ -0.3
LINC02228-204ENST00000642115 ZDHHC16Q969W1 377 aa13.15□□□□□ -0.3
LINC02228-204ENST00000642115 TMEM147Q9BVK8 224 aa13.15□□□□□ -0.3
LINC02228-204ENST00000642115 SFXN3Q9BWM7 321 aa13.15□□□□□ -0.3
LINC02228-204ENST00000642115 IL19Q9UHD0 177 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms