RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	HPGDS	O60760	199 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR8U8	P0C7N1	319 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	SAA1	P0DJI8	122 aa	Predicted RBP	11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	NAT1	P18440	290 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	ELK1	P19419	428 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	HOXD3	P31249	432 aa	Predicted RBP	11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	TPPP2	P59282	170 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	FXYD4	P59646	89 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	ZNF616	Q08AN1	781 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	EGFEM1P	Q0D2K5	195 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	MZT2A	Q6P582	158 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	ZBTB34	Q8NCN2	500 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	MRAP	Q8TCY5	172 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	AP3S1	Q92572	193 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	SLC5A7	Q9GZV3	580 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	ZNF355P	Q9NSJ1	428 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939	EHF	Q9NZC4	300 aa		11.66	□□□□□ -0.54
PHGDH-231	ENST00000641939		H3BUA1	57 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	TNFSF12	O43508	249 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	CREBL2	O60519	120 aa	Predicted RBP	11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	TRGV3	P03979	118 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	LGALS1	P09382	135 aa	Known RBP	11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	ZNF182	P17025	639 aa	Predicted RBP	11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	KIR2DS2	P43631	304 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	RFX2	P48378	723 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	BRWD1-AS2	P59051	145 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	TAS2R46	P59540	309 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	KRTAP10-11	P60412	298 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	HERV-K104	P61576	105 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	TNXA	Q16473	311 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	ASPHD1	Q5U4P2	390 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	DHRS11	Q6UWP2	260 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	POC5	Q8NA72	575 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR5T1	Q8NG75	326 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	OR5H2	Q8NGV7	314 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	GPX8	Q8TED1	209 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	GPHA2	Q96T91	129 aa		11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	ALX4	Q9H161	411 aa	Predicted RBP	11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.65	□□□□□ -0.54
PHGDH-231	ENST00000641939	MSGN1	A6NI15	193 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	PMP2	P02689	132 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	DYRK1A	Q13627	763 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	ZNF818P	Q6ZRF7	136 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	TMEM17	Q86X19	198 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	SNX29P2	Q8IUI4	249 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	MMD2	Q8IY49	270 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	SRSF12	Q8WXF0	261 aa	Known RBP	11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	RHOV	Q96L33	236 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	PHB2	Q99623	299 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	SCPEP1	Q9HB40	452 aa		11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	ZMAT5	Q9UDW3	170 aa	Known RBP	11.64	□□□□□ -0.55
PHGDH-231	ENST00000641939	FAM25A	B3EWG3	89 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	FAM25C	B3EWG5	89 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	FAM25G	B3EWG6	89 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	SEC14L6	B5MCN3	397 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	LINC01619	G3V211	115 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	ACTL6B	O94805	426 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	OR2A4	O95047	310 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	HRAS	P01112	189 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	IGHV3-11	P01762	117 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	CATR1	Q13166	79 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	C9orf66	Q5T8R8	295 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	LYSMD2	Q8IV50	215 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	VKORC1L1	Q8N0U8	176 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	VSTM2A	Q8TAG5	236 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	BORCS5	Q969J3	196 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	OR2A7	Q96R45	310 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	ADAM30	Q9UKF2	790 aa		11.63	□□□□□ -0.55
PHGDH-231	ENST00000641939	C13orf42	A0A1B0GVH6	325 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	SULT1C2	O00338	296 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	RAMP3	O60896	148 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	KBTBD11	O94819	623 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	BRI3	O95415	125 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	APELA	P0DMC3	54 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	HLA-DMA	P28067	261 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	GNRHR	P30968	328 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	HRH1	P35367	487 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	SPAG16	Q8N0X2	631 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	PUSL1	Q8N0Z8	303 aa	Known RBP	11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	MOB3A	Q96BX8	217 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	SPIN2A	Q99865	258 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	SPIN2B	Q9BPZ2	258 aa		11.62	□□□□□ -0.55
PHGDH-231	ENST00000641939	IGHV4OR15-8	A0A075B7B6	117 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939		A0A087WW49	117 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939		A0A0G2JLM5	398 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939		K7EIL1	84 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	MPPED1	O15442	326 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	HSPB1	P04792	205 aa	Known RBP	11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	OR9G9	P0C7N8	305 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	RCVRN	P35243	200 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	ADAD2	Q8NCV1	583 aa	Known RBP	11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	OR6F1	Q8NGZ6	308 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	OR51H1	Q8NH63	302 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	TMEM167A	Q8TBQ9	72 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	DCUN1D4	Q92564	292 aa		11.61	□□□□□ -0.55
PHGDH-231	ENST00000641939	AIFM2	Q9BRQ8	373 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms