RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 ISOC1Q96CN7 298 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 OR5B12Q96R08 314 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 ABHD1Q96SE0 405 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 BCL7BQ9BQE9 202 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 SCOCQ9UIL1 159 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 SAA1P0DJI8 122 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-227ENST00000641811 GNRHRP30968 328 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 RCVRNP35243 200 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 MYCNOSP40205 109 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 MSMO1Q15800 293 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 PRSS8Q16651 343 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 BEAN1Q3B7T3 259 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 AKIRIN2Q53H80 203 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 ACTBL2Q562R1 376 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 ZNF491Q8N8L2 437 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 OR52I2Q8NH67 350 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 OR4S2Q8NH73 311 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 P2RX4Q99571 388 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 GNB4Q9HAV0 340 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 CCDC59Q9P031 241 aaKnown RBP13.48□□□□□ -0.25
PHGDH-227ENST00000641811 KLK11Q9UBX7 282 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 CEPT1Q9Y6K0 416 aa13.48□□□□□ -0.25
PHGDH-227ENST00000641811 CCL24O00175 119 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 SULT1C2O00338 296 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 WIPF1O43516 503 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 RAMP3O60896 148 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
PHGDH-227ENST00000641811 SLC6A1P30531 599 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 TNXAQ16473 311 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 ZBTB34Q8NCN2 500 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 OR5T1Q8NG75 326 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 OR6F1Q8NGZ6 308 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 C4orf3Q8WVX3 66 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 MS4A10Q96PG2 267 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 FXYD6Q9H0Q3 95 aa13.47□□□□□ -0.25
PHGDH-227ENST00000641811 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-227ENST00000641811 M0QYG6 137 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 PRB2P02812 416 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-227ENST00000641811 APELAP0DMC3 54 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 RAB25P57735 213 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 ASPHD1Q5U4P2 390 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 SPAG16Q8N0X2 631 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 TCTEX1D1Q8N7M0 179 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 OR51H1Q8NH63 302 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 UBE2E2Q96LR5 201 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 VSIG4Q9Y279 399 aa13.46□□□□□ -0.25
PHGDH-227ENST00000641811 MSGN1A6NI15 193 aa13.45□□□□□ -0.26
PHGDH-227ENST00000641811 TSPAN5P62079 268 aa13.45□□□□□ -0.26
PHGDH-227ENST00000641811 C10orf55Q5SWW7 151 aa13.45□□□□□ -0.26
PHGDH-227ENST00000641811 KPRPQ5T749 579 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-227ENST00000641811 SSX9Q7RTT3 188 aa13.45□□□□□ -0.26
PHGDH-227ENST00000641811 OR5M8Q8NGP6 311 aa13.45□□□□□ -0.26
PHGDH-227ENST00000641811 SLIRPQ9GZT3 109 aaKnown RBP13.45□□□□□ -0.26
PHGDH-227ENST00000641811 ALX4Q9H161 411 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-227ENST00000641811 I3L521 148 aa13.44□□□□□ -0.26
PHGDH-227ENST00000641811 KIR2DS2P43631 304 aa13.44□□□□□ -0.26
PHGDH-227ENST00000641811 DGCR2P98153 550 aa13.44□□□□□ -0.26
PHGDH-227ENST00000641811 CATR1Q13166 79 aa13.44□□□□□ -0.26
PHGDH-227ENST00000641811 AADACL3Q5VUY0 350 aa13.44□□□□□ -0.26
PHGDH-227ENST00000641811 PUSL1Q8N0Z8 303 aaKnown RBP13.44□□□□□ -0.26
PHGDH-227ENST00000641811 RHOVQ96L33 236 aa13.44□□□□□ -0.26
PHGDH-227ENST00000641811 TINAGL1Q9GZM7 467 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-227ENST00000641811 C6orf62Q9GZU0 229 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-227ENST00000641811 ZNF355PQ9NSJ1 428 aa13.44□□□□□ -0.26
PHGDH-227ENST00000641811 MTFP1Q9UDX5 166 aa13.44□□□□□ -0.26
PHGDH-227ENST00000641811 TNCP24821 2201 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 CCDC160A6NGH7 325 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 PGLYRP1O75594 196 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-227ENST00000641811 TPPPO94811 219 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 OR2A4O95047 310 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 IGHV3-11P01762 117 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 CD3DP04234 171 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 RLN1P04808 185 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 TPPP2P59282 170 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 PYHIN1Q6K0P9 492 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 MMD2Q8IY49 270 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 OR11H1Q8NG94 326 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 FCAMRQ8WWV6 532 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 SRSF12Q8WXF0 261 aaKnown RBP13.43□□□□□ -0.26
PHGDH-227ENST00000641811 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 RCC1LQ96I51 464 aaKnown RBP13.43□□□□□ -0.26
PHGDH-227ENST00000641811 OR2A7Q96R45 310 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 PHB2Q99623 299 aa13.43□□□□□ -0.26
PHGDH-227ENST00000641811 RBFOX2O43251 390 aaKnown RBP eCLIP13.42□□□□□ -0.267e-8■■□□□ 12.4
PHGDH-227ENST00000641811 KBTBD11O94819 623 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 HRASP01112 189 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 TRGV3P03979 118 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 RUNX1Q01196 453 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 DEFA5Q01523 94 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 PHLDA2Q53GA4 152 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 VAX1Q5SQQ9 334 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 FOXB2Q5VYV0 432 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 POC5Q8NA72 575 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 TMEM167AQ8TBQ9 72 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 C15orf40Q8WUR7 153 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 BORCS5Q969J3 196 aa13.42□□□□□ -0.26
PHGDH-227ENST00000641811 GABARAPH6UMI1 98 aa13.41□□□□□ -0.26
PHGDH-227ENST00000641811 GPR31O00270 319 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms