RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ZNF439Q8NDP4 499 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 ZNF596Q8TC21 504 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 AKR1E2Q96JD6 320 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 NOL4LQ96MY1 436 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-222ENST00000641587 RBM14Q96PK6 669 aaKnown RBP7.9□□□□□ -1.14
PHGDH-222ENST00000641587 PRR25Q96S07 402 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 RSRP1Q9BUV0 290 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 IFI27L2Q9H2X8 130 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 SLC2A9Q9NRM0 540 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 DPM3Q9P2X0 92 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 LINC00527Q9UJ94 153 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 GPR132Q9UNW8 380 aa7.9□□□□□ -1.14
PHGDH-222ENST00000641587 AMMECR1Q9Y4X0 333 aaPredicted RBP7.9□□□□□ -1.14
PHGDH-222ENST00000641587 STARD9Q9P2P6 4700 aa7.9□□□□□ -1.15
PHGDH-222ENST00000641587 DNAH1Q9P2D7 4330 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 SAA2-SAA4A0A096LPE2 208 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 PSMB11A5LHX3 300 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 M0R1X1 148 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 ITGB1BP1O14713 200 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 RAB29O14966 203 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 SAA2P0DJI9 122 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-222ENST00000641587 GNRHRP30968 328 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 ZNF134P52741 427 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 HLA-DRB5Q30154 266 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 RPL39P5Q59GN2 51 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 C8orf31Q8N9H6 132 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 KLHL30-AS1Q8NEE0 82 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 ZNF486Q96H40 463 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-222ENST00000641587 GPHA2Q96T91 129 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 S1PR3Q99500 378 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 MARVELD1Q9BSK0 173 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 C5orf66Q9H5L9 145 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 PIPOXQ9P0Z9 390 aa7.89□□□□□ -1.15
PHGDH-222ENST00000641587 hCG_2014768A0A024R1R8 64 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 NUDT19A8MXV4 375 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 IGLV1-47P01700 117 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 BRS3P32247 399 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 REG1BP48304 166 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 CATR1Q13166 79 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 CBX3Q13185 183 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 TPTE2P1Q5T6R2 138 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 KCTD9Q7L273 389 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 TBC1D26Q86UD7 250 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 SLC25A42Q86VD7 318 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 SGPP2Q8IWX5 399 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 LINC00311Q8N616 119 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-222ENST00000641587 ZBTB34Q8NCN2 500 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 BVESQ8NE79 360 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 OR51H1Q8NH63 302 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 CASTOR1Q8WTX7 329 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 TCTEX1D2Q8WW35 142 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 RTN4IP1Q8WWV3 396 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-222ENST00000641587 RPEQ96AT9 228 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 P2RX4Q99571 388 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 SEC22CQ9BRL7 303 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 AGMATQ9BSE5 352 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 RTBDNQ9BSG5 229 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-222ENST00000641587 GPR61Q9BZJ8 451 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 GPN1Q9HCN4 374 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-222ENST00000641587 SDHAF2Q9NX18 166 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 LSM4Q9Y4Z0 139 aaKnown RBP7.88□□□□□ -1.15
PHGDH-222ENST00000641587 STAB2Q8WWQ8 2551 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 HYDINQ4G0P3 5121 aa7.88□□□□□ -1.15
PHGDH-222ENST00000641587 BUB1B-PAK6H3BSN5 160 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 PRAF2O60831 178 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 HLA-AP01891 365 aaKnown RBP7.87□□□□□ -1.15
PHGDH-222ENST00000641587 OR4E1P0C645 316 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 ANXA3P12429 323 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 CEACAM3P40198 252 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 UBE2MP61081 183 aaKnown RBP7.87□□□□□ -1.15
PHGDH-222ENST00000641587 RND3P61587 244 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 PPP1R1AQ13522 171 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 MSMO1Q15800 293 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 TATDN3Q17R31 274 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 DEFB136Q30KP8 78 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 TMEM128Q5BJH2 165 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 OR2B11Q5JQS5 317 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 LCNL1Q6ZST4 164 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 TGIF2LXQ8IUE1 241 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 ODF3L1Q8IXM7 274 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 DRAXINQ8NBI3 349 aaPredicted RBP7.87□□□□□ -1.15
PHGDH-222ENST00000641587 OR52B4Q8NGK2 314 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 TMEM230Q96A57 120 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 C5orf30Q96GV9 206 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 HSD17B10Q99714 261 aaKnown RBP7.87□□□□□ -1.15
PHGDH-222ENST00000641587 MRPL20Q9BYC9 149 aaKnown RBP7.87□□□□□ -1.15
PHGDH-222ENST00000641587 GHITMQ9H3K2 345 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 NAA60Q9H7X0 242 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 LIN7CQ9NUP9 197 aaKnown RBP7.87□□□□□ -1.15
PHGDH-222ENST00000641587 KCNIP3Q9Y2W7 256 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 MOB4Q9Y3A3 225 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 ALG5Q9Y673 324 aa7.87□□□□□ -1.15
PHGDH-222ENST00000641587 C3orf85A0A1B0GTC6 90 aa7.86□□□□□ -1.15
PHGDH-222ENST00000641587 CRYM-AS1A6NIL9 109 aa7.86□□□□□ -1.15
PHGDH-222ENST00000641587 LEUTXA8MZ59 168 aa7.86□□□□□ -1.15
PHGDH-222ENST00000641587 C3orf84H3BNL1 204 aa7.86□□□□□ -1.15
PHGDH-222ENST00000641587 LY6LH3BQJ8 138 aa7.86□□□□□ -1.15
PHGDH-222ENST00000641587 MPPED1O15442 326 aa7.86□□□□□ -1.15
PHGDH-222ENST00000641587 SSNA1O43805 119 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms