RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 STX12Q86Y82 276 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 NEIL1Q96FI4 390 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-216ENST00000641375 NIT2Q9NQR4 276 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 A0A087X0M5 115 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 A0A1B0GX30 115 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 LY6HO94772 140 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 FOLR2P14207 255 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 ERVFRD-1P60508 538 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 SLC16A13Q7RTY0 426 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 LINC00311Q8N616 119 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 ZNF596Q8TC21 504 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 SMIM8Q96KF7 97 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 TMEM218A2RU14 115 aa13.46□□□□□ -0.25
PHGDH-216ENST00000641375 RBMXL2O75526 392 aaKnown RBP13.46□□□□□ -0.25
PHGDH-216ENST00000641375 IGHV1-8P0DP01 117 aa13.46□□□□□ -0.25
PHGDH-216ENST00000641375 BSCL2Q96G97 398 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-216ENST00000641375 CACFD1Q9UGQ2 172 aa13.46□□□□□ -0.25
PHGDH-216ENST00000641375 DCHS2Q6V1P9 2916 aa13.46□□□□□ -0.26
PHGDH-216ENST00000641375 TXNL1O43396 289 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 CRYBA1P05813 215 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 FBP1P09467 338 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 GUCA2BQ16661 112 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 C10orf91Q5T1B1 145 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 TMEM88Q6PEY1 159 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 ZNF833PQ6ZTB9 187 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 ARV1Q9H2C2 271 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 PSENENQ9NZ42 101 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 J3QR06 171 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 UBE2CO00762 179 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 RBP4P02753 201 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 SULT1A1P50225 295 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 WDR25Q64LD2 544 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-216ENST00000641375 FAM71F2Q6NXP2 309 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 ZNF295-AS1Q8N0V1 137 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 ZNF383Q8NA42 475 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 OR5C1Q8NGR4 320 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 OR10X1Q8NGY0 326 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 OR9G1Q8NH87 305 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 C8orf46Q8TAG6 207 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 WFDC1Q9HC57 220 aa13.45□□□□□ -0.26
PHGDH-216ENST00000641375 FGF16O43320 207 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 CST7O76096 145 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 F12P00748 615 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-216ENST00000641375 IAPPP10997 89 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 RAB5BP61020 215 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 RTL8BQ17RB0 113 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 RNF212Q495C1 297 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 TMEM186Q96B77 213 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 CIB3Q96Q77 187 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-216ENST00000641375 GINS3Q9BRX5 216 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 RBKSQ9H477 322 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 CARHSP1Q9Y2V2 147 aaKnown RBP13.44□□□□□ -0.26
PHGDH-216ENST00000641375 hCG_1809904A0A1W2PP81 198 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 A0A1W2PPE2 198 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 A0A1W2PR64 198 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 A0A1W2PRV1 198 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 CT45A6P0DMU7 189 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 CT45A5P0DMU8 189 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 CT45A7P0DMV0 189 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 CDKN1AP38936 164 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 AARDQ4LEZ3 155 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 CBLN2Q8IUK8 224 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 C11orf42Q8N5U0 333 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 TMEM133Q9H2Q1 129 aa13.44□□□□□ -0.26
PHGDH-216ENST00000641375 MALRD1Q5VYJ5 2156 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 PPIAL4CA0A0B4J2A2 164 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 H3BP45 60 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 LY86O95711 162 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 HRASP01112 189 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 SEC11BP0C7V7 166 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 PPIAL4GP0DN37 164 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 CLINT1Q14677 625 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 ZNF124Q15973 351 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 ABHD12Q8N2K0 398 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 TMEM217Q8N7C4 229 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 OR1S2Q8NGQ3 325 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 OR4A16Q8NH70 328 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 C2CD4CQ8TF44 421 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 TNFRSF14Q92956 283 aa13.43□□□□□ -0.26
PHGDH-216ENST00000641375 BBC3Q96PG8 261 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-216ENST00000641375 C5orf52A6NGY3 159 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 FBXO24O75426 580 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 DFFBO76075 338 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 PRB1P04280 392 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 FAM157CP0CG43 387 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 DYNLT3P51808 116 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 EFNA4P52798 201 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 SSX9Q7RTT3 188 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 PATZ1Q9HBE1 687 aaKnown RBP13.42□□□□□ -0.26
PHGDH-216ENST00000641375 ZNRD1Q9P1U0 126 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 OR9G9P0C7N8 305 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 IL3RAP26951 378 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 ZNF137PP52743 207 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 GNB2P62879 340 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 HBG1P69891 147 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 HBG2P69892 147 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 RXFP4Q8TDU9 374 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 SAT2Q96F10 170 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-216ENST00000641375 RHOVQ96L33 236 aa13.42□□□□□ -0.26
PHGDH-216ENST00000641375 SLC35D1Q9NTN3 355 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms