RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 PINLYPA6NC86 204 aa10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 IGHV3-9P01782 118 aa10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 LIFP15018 202 aa10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 SOX8P57073 446 aa10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 ATP1A1-AS1Q5TC04 95 aa10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 ZNF818PQ6ZRF7 136 aa10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 ZNF331Q9NQX6 463 aaPredicted RBP10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 HSPB7Q9UBY9 170 aa10.05□□□□□ -0.8
RBFOX1-224ENST00000641259 ZFHX2Q9C0A1 2572 aaPredicted RBP10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 IGHV2OR16-5A0A0B4J2B6 119 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 ZNF732B4DXR9 585 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 RFPL3SP0C7P2 107 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 C3orf79P0CE67 100 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 SRP14P37108 136 aaKnown RBP10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 ZNF726P1Q15940 193 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 HIST3H3Q16695 136 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 OR10P1Q8NGE3 313 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 BSNQ9UPA5 3926 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 ANOS1P23352 680 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 CA7P43166 264 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 RPP25LQ8N5L8 163 aaKnown RBP10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 TMEM222Q9H0R3 208 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 TMEM242Q9NWH2 141 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 USF3Q68DE3 2245 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 GPR6P46095 362 aaPredicted RBP10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 NHLH1Q02575 133 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 FDX2Q6P4F2 183 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 SSMEM1Q8WWF3 244 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 SFRP2Q96HF1 295 aa10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 SSBP3Q9BWW4 388 aaPredicted RBP10.04□□□□□ -0.8
RBFOX1-224ENST00000641259 QRFPP83859 136 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 SRSF6Q13247 344 aaKnown RBP10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 SPINK14Q6IE38 97 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 SELENOHQ8IZQ5 122 aaKnown RBP10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 APOBEC3DQ96AK3 386 aaPredicted RBP10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 GPR146Q96CH1 333 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 LRFN3Q9BTN0 628 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 ALKBH4Q9NXW9 302 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 OR1A1Q9P1Q5 309 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 A0A087X0K7 114 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 GJE1A6NN92 205 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 M0R135 149 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 ZP4Q12836 540 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 DOLPP1Q86YN1 238 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 ZNF114Q8NC26 417 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 ZNF799Q96GE5 643 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 OR8B2Q96RD0 313 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 ATMQ13315 3056 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 DMXL2Q8TDJ6 3036 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 CA1P00915 261 aaPredicted RBP10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 KRTCAP3Q53RY4 240 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 OSR2Q8N2R0 312 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 TAF15Q92804 592 aaKnown RBP eCLIP10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 HES7Q9BYE0 225 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 SLC45A2Q9UMX9 530 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 RNF114Q9Y508 228 aa10.03□□□□□ -0.8
RBFOX1-224ENST00000641259 SELENOVP59797 346 aa10.02□□□□□ -0.8
RBFOX1-224ENST00000641259 ARL16Q0P5N6 197 aa10.02□□□□□ -0.8
RBFOX1-224ENST00000641259 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.8
RBFOX1-224ENST00000641259 SIGLEC12Q96PQ1 595 aa10.02□□□□□ -0.8
RBFOX1-224ENST00000641259 TAAR3PQ9P1P4 343 aa10.02□□□□□ -0.8
RBFOX1-224ENST00000641259 LSM4Q9Y4Z0 139 aaKnown RBP10.02□□□□□ -0.8
RBFOX1-224ENST00000641259 MED13Q9UHV7 2174 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 FTH1P19P0C7X4 201 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 CA6P23280 308 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 BMI1P35226 326 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 FOXA3P55318 350 aaPredicted RBP10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 RAET1LQ5VY80 246 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 TMEM186Q96B77 213 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 P2RX4Q99571 388 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 QTRT1Q9BXR0 403 aaKnown RBP10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 GSX1Q9H4S2 264 aaPredicted RBP10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 A0A1B0GW64 132 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 PRR33A8MZF0 331 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 H3BUT2 72 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 ISG15P05161 165 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 B3GALT5-AS1P59052 145 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 ZNF611Q8N823 705 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 OR4D5Q8NGN0 318 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 C18orf12Q96KH6 178 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 UCN2Q96RP3 112 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 THYN1Q9P016 225 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 PXMP4Q9Y6I8 212 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 MGAQ8IWI9 3026 aa10.02□□□□□ -0.81
RBFOX1-224ENST00000641259 TMEM164Q5U3C3 297 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 YRDCQ86U90 279 aaKnown RBP10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 OR8B3Q8NGG8 313 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 RCHY1Q96PM5 261 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 IGKV1D-13A0A0B4J2D9 117 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 SCO2A0A1W2PP80 73 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 SLC22A20A6NK97 555 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 IGKV1-13P0DP09 117 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 DSCR4P56555 118 aaPredicted RBP10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 TFF3Q07654 80 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 LHFPL6Q9Y693 200 aa10.01□□□□□ -0.81
RBFOX1-224ENST00000641259 TRAV30A0A087WSZ9 112 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms