RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 A0A0A6YYD4 124 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 FAM201AQ5SY85 155 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 ELOA3CA0A087WX78 387 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-223ENST00000640640 ZNF385CQ66K41 422 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-223ENST00000640640 MRPL54Q6P161 138 aaKnown RBP14.88□□□□□ -0.03
SCARB2-223ENST00000640640 OR9G1Q8NH87 305 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 TXNDC17Q9BRA2 123 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 PAXXQ9BUH6 204 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 VAMP8Q9BV40 100 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 HYPMO75409 117 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 FHL1Q13642 323 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 TMEM30BQ3MIR4 351 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 LDLRAD3Q86YD5 345 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 OR13A1Q8NGR1 328 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 BMI1P35226 326 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 RARRES2Q99969 163 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 RPRMQ9NS64 109 aa14.88□□□□□ -0.03
SCARB2-223ENST00000640640 P01737 135 aa14.87□□□□□ -0.03
SCARB2-223ENST00000640640 CSRP1P21291 193 aaKnown RBP14.87□□□□□ -0.03
SCARB2-223ENST00000640640 USF1P22415 310 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-223ENST00000640640 MUC15Q8N387 334 aa14.87□□□□□ -0.03
SCARB2-223ENST00000640640 SCN8AQ9UQD0 1980 aa14.87□□□□□ -0.03
SCARB2-223ENST00000640640 RPL39P5Q59GN2 51 aa14.87□□□□□ -0.03
SCARB2-223ENST00000640640 PQLC2Q6ZP29 291 aa14.87□□□□□ -0.03
SCARB2-223ENST00000640640 OR4C13Q8NGP0 309 aa14.87□□□□□ -0.03
SCARB2-223ENST00000640640 IGHV1-69-2A0A0G2JMI3 117 aa14.87□□□□□ -0.03
SCARB2-223ENST00000640640 SS18L1O75177 396 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-223ENST00000640640 METTL1Q9UBP6 276 aaKnown RBP14.87□□□□□ -0.03
SCARB2-223ENST00000640640 MED13LQ71F56 2210 aa14.87□□□□□ -0.03
SCARB2-223ENST00000640640 PRSS3P2Q8NHM4 247 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 DCTN5Q9BTE1 182 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 HELZP42694 1942 aaKnown RBP14.86□□□□□ -0.03
SCARB2-223ENST00000640640 IGKV1D-8A0A087WSZ0 117 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 PPIAL4CA0A0B4J2A2 164 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 PCNX2A6NKB5 2137 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 PPIAL4GP0DN37 164 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 Q0VFX4 171 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 ECSCRQ19T08 205 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 C16orf82Q7Z2V1 217 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 FAM57AQ8TBR7 257 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 GFRA1P56159 465 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 FAM166AQ6J272 317 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 P2RX4Q99571 388 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 SPRR3Q9UBC9 169 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 IGKV1-12A0A0C4DH73 117 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 CORTO00230 105 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 IGKV1D-12P01611 117 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 RND2P52198 227 aa14.86□□□□□ -0.03
SCARB2-223ENST00000640640 DLL1O00548 723 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 MMP7P09237 267 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-223ENST00000640640 SMIM17P0DL12 118 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 NAT1P18440 290 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 ARF6P62330 175 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 PLPPR1Q8TBJ4 325 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 TMEM186Q96B77 213 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 PLXNA4Q9HCM2 1894 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 TRBV6-7A0A0A0MS04 114 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 SNURFLB1AK76 121 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 B9A039 149 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 LDLRAD4O15165 306 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 FAM87AP0C7U9 286 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 MDKP21741 143 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-223ENST00000640640 PARD6AQ9NPB6 346 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 ZFHX2Q9C0A1 2572 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-223ENST00000640640 IGKV1D-13A0A0B4J2D9 117 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 PLAUP00749 431 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 IGKV1-13P0DP09 117 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 FAM216BQ8N7L0 139 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 LINC01560Q8TB33 94 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 PSMG3Q9BT73 122 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-223ENST00000640640 RNF126Q9BV68 326 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 TANC1Q9C0D5 1861 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 C17orf98A8MV24 154 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 MPZP25189 248 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 IER3P46695 156 aa14.85□□□□□ -0.03
SCARB2-223ENST00000640640 OR5AU1Q8NGC0 362 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 HIGD1AQ9Y241 93 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 USF3Q68DE3 2245 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 HIST1H1EP10412 219 aaKnown RBP14.84□□□□□ -0.03
SCARB2-223ENST00000640640 FAM122AQ96E09 287 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 QTRT1Q9BXR0 403 aaKnown RBP14.84□□□□□ -0.03
SCARB2-223ENST00000640640 GTF3AQ92664 365 aaKnown RBP14.84□□□□□ -0.03
SCARB2-223ENST00000640640 STARD4Q96DR4 205 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 PACRGQ96M98 296 aaPredicted RBP14.84□□□□□ -0.03
SCARB2-223ENST00000640640 PRO1933Q9H354 126 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 PITPNC1Q9UKF7 332 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 TICRRQ7Z2Z1 1910 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 SHANK1Q9Y566 2161 aa14.84□□□□□ -0.03
SCARB2-223ENST00000640640 ZNF788Q6ZQV5 615 aa14.83□□□□□ -0.03
SCARB2-223ENST00000640640 TNFRSF19Q9NS68 423 aa14.83□□□□□ -0.03
SCARB2-223ENST00000640640 TMEM106BQ9NUM4 274 aa14.83□□□□□ -0.03
SCARB2-223ENST00000640640 OR1L6Q8NGR2 347 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 ZNF430Q9H8G1 570 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-223ENST00000640640 FRMPD3Q5JV73 1810 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.83□□□□□ -0.042e-8■■■□□ 17.7
SCARB2-223ENST00000640640 TRAV20A0A0B4J274 112 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 H0YIZ8 118 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 APOBEC3AP31941 199 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-223ENST00000640640 HLA-DRB5Q30154 266 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 PNRC2Q9NPJ4 139 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms