RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PRSS3P2Q8NHM4 247 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 SMIM8Q96KF7 97 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 RASL11BQ9BPW5 248 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 IL19Q9UHD0 177 aa12.23□□□□□ -0.45
SCARB2-216ENST00000639300 C17orf98A8MV24 154 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 NTN3O00634 580 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-216ENST00000639300 LINC00869P0C866 280 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 SRSF3P84103 164 aaKnown RBP12.22□□□□□ -0.45
SCARB2-216ENST00000639300 FAM208BQ5VWN6 2430 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 ZNF524Q96C55 264 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 RNF2Q99496 336 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 PQLC2LA1A4F0 135 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 CEACAM18A8MTB9 384 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 RPL8P62917 257 aaKnown RBP12.22□□□□□ -0.45
SCARB2-216ENST00000639300 HLA-DRB5Q30154 266 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 OR2D3Q8NGH3 330 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 GTF3C1Q12789 2109 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 LDLRAD4O15165 306 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 HNRNPA3P51991 378 aaKnown RBP12.22□□□□□ -0.45
SCARB2-216ENST00000639300 C5orf24Q7Z6I8 188 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 GCSAMQ8N6F7 178 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 OR13A1Q8NGR1 328 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 PLSCR2Q9NRY7 297 aa12.22□□□□□ -0.45
SCARB2-216ENST00000639300 IGKV3-7A0A075B6H7 116 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 MPDU1O75352 247 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 NAT1P18440 290 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 RPL27AP46776 148 aaKnown RBP12.21□□□□□ -0.45
SCARB2-216ENST00000639300 MFAP2P55001 183 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 WDR73Q6P4I2 378 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 CLEC5AQ9NY25 188 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 COA4Q9NYJ1 87 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 PLPPR1Q8TBJ4 325 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 NABP1Q96AH0 204 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 CISD1Q9NZ45 108 aaKnown RBP12.21□□□□□ -0.45
SCARB2-216ENST00000639300 CACNA1AO00555 2505 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 CRYGSP22914 178 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 HIST3H3Q16695 136 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 POM121Q96HA1 1249 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 WDYHV1Q96HA8 205 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 FAM117AQ9C073 453 aa12.21□□□□□ -0.45
SCARB2-216ENST00000639300 FOXD3Q9UJU5 478 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-216ENST00000639300 ACACBO00763 2458 aa12.21□□□□□ -0.46
SCARB2-216ENST00000639300 OR2J3O76001 311 aa12.21□□□□□ -0.46
SCARB2-216ENST00000639300 VAMP3Q15836 100 aa12.21□□□□□ -0.46
SCARB2-216ENST00000639300 PAXXQ9BUH6 204 aa12.21□□□□□ -0.46
SCARB2-216ENST00000639300 TMSB15BA0A087X1C1 80 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 NRN1LQ496H8 165 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 ACP7Q6ZNF0 438 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
SCARB2-216ENST00000639300 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
SCARB2-216ENST00000639300 GGNQ86UU5 652 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 C9orf106Q8NAJ2 232 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 PARLQ9H300 379 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 JPT1Q9UK76 154 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 PTPRQQ9UMZ3 2332 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 P01737 135 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 GLRXP35754 106 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 RND2P52198 227 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 ZNF137PP52743 207 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 ASCL5Q7RTU5 278 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 OR5AU1Q8NGC0 362 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 PERPQ96FX8 193 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 SGK494Q96LW2 274 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 MUC6Q6W4X9 2439 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 E9PQ18 207 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 PAX6P26367 422 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 FAM122AQ96E09 287 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 UBTD1Q9HAC8 227 aa12.2□□□□□ -0.46
SCARB2-216ENST00000639300 ARL14EPLP0DKL9 152 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 GP6Q9HCN6 339 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 IDI2-AS1Q9NZ38 188 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 J3QW42 95 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 REG1AP05451 166 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 ZDHHC8Q9ULC8 765 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 F8VVB4 439 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 F8VWA3 439 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 KBTBD11O94819 623 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 ZNF581Q9P0T4 197 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 WASHC3Q9Y3C0 194 aa12.19□□□□□ -0.46
SCARB2-216ENST00000639300 TMEM183BQ1AE95 376 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 FAM216BQ8N7L0 139 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 NOTCH2Q04721 2471 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 PLCE1Q9P212 2302 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 H3BTX0 84 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 HYPMO75409 117 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 CARHSP1Q9Y2V2 147 aaKnown RBP12.18□□□□□ -0.46
SCARB2-216ENST00000639300 TRAV24A0A0B4J272 114 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-216ENST00000639300 BRS3P32247 399 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 Q8WTZ3 238 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 MRPS18CQ9Y3D5 142 aaKnown RBP12.18□□□□□ -0.46
SCARB2-216ENST00000639300 LHFPL1Q86WI0 220 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 ZCCHC24Q8N2G6 241 aaKnown RBP12.18□□□□□ -0.46
SCARB2-216ENST00000639300 STXBP6Q8NFX7 210 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 WFIKKN1Q96NZ8 548 aa12.18□□□□□ -0.46
SCARB2-216ENST00000639300 NAGKQ9UJ70 344 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms