RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 RAB1CQ92928 201 aa6.66□□□□□ -1.34
CDKL5-211ENST00000637881 ABHD17AQ96GS6 310 aa6.66□□□□□ -1.34
CDKL5-211ENST00000637881 C5orf30Q96GV9 206 aa6.66□□□□□ -1.34
CDKL5-211ENST00000637881 JMJD8Q96S16 334 aa6.66□□□□□ -1.34
CDKL5-211ENST00000637881 TMEM204Q9BSN7 226 aa6.66□□□□□ -1.34
CDKL5-211ENST00000637881 FNDC4Q9H6D8 234 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-211ENST00000637881 MCTS1Q9ULC4 181 aaKnown RBP6.66□□□□□ -1.34
CDKL5-211ENST00000637881 B3GALT1Q9Y5Z6 326 aa6.66□□□□□ -1.34
CDKL5-211ENST00000637881 TDRD6O60522 2096 aaKnown RBP6.66□□□□□ -1.34
CDKL5-211ENST00000637881 PCNX3Q9H6A9 2034 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 IGKV1D-8A0A087WSZ0 117 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 A0A0G2JLM5 398 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 ZNF850A8MQ14 1090 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 C9JCJ5 164 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 PAGE4O60829 102 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 EML2O95834 649 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 AMY1AP04745 511 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 SERPINE2P07093 398 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 ADH4P08319 380 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 OR9G9P0C7N8 305 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 ZNF823P16415 610 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 NPPCP23582 126 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 MLF1P58340 268 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 GNB1P62873 340 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 AESQ08117 197 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 TESK1Q15569 626 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.65□□□□□ -1.34
CDKL5-211ENST00000637881 PHLDA2Q53GA4 152 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 TMEM177Q53S58 311 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 SPATA46Q5T0L3 261 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 MARCH3Q86UD3 253 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 DOLPP1Q86YN1 238 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 SLC25A45Q8N413 288 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 OR5D13Q8NGL4 314 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 HARBI1Q96MB7 349 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 RCHY1Q96PM5 261 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 QTRT1Q9BXR0 403 aaKnown RBP6.65□□□□□ -1.34
CDKL5-211ENST00000637881 OR2D2Q9H210 308 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 MS4A5Q9H3V2 200 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 PNRC2Q9NPJ4 139 aaKnown RBP6.65□□□□□ -1.34
CDKL5-211ENST00000637881 TBC1D29Q9UFV1 150 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 NAT8BQ9UHF3 227 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 PLAGL1Q9UM63 463 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 UBE2J1Q9Y385 318 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-211ENST00000637881 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 SPEGQ15772 3267 aa6.65□□□□□ -1.34
CDKL5-211ENST00000637881 PI4KAP42356 2102 aa6.65□□□□□ -1.35
CDKL5-211ENST00000637881 A0A1B0GW15 77 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 hADV38S2A0JD32 116 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 TLX3O43711 291 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 HSBP1O75506 76 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 CER1O95813 267 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 CLDN1O95832 211 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 THBDP07204 575 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 FAM87AP0C7U9 286 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 HIST1H1EP10412 219 aaKnown RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 FABP2P12104 132 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 COX5AP20674 150 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 CCL1P22362 96 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 USF1P22415 310 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 GATA2P23769 480 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 CX3CL1P78423 397 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 RPL24P83731 157 aaKnown RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 ARF1P84077 181 aaKnown RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 TRIP6Q15654 476 aaKnown RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 ZNF585BQ52M93 769 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 Q56UQ5 140 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 PLA2G2CQ5R387 149 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 PEAR1Q5VY43 1037 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 LCN12Q6JVE5 192 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 EBLN2Q6P2I7 272 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 SLC25A47Q6Q0C1 308 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 ZNF562Q6V9R5 426 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 BPIFA4PQ86YQ2 179 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 TTC9CQ8N5M4 171 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 OR10G9Q8NGN4 311 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 APOBEC3DQ96AK3 386 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 RTN4RQ9BZR6 473 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 PBOV1Q9GZY1 135 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 LIME1Q9H400 295 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 FAM60AQ9NP50 221 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 SS18L2Q9UHA2 77 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 NXT1Q9UKK6 140 aaKnown RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 CYSLTR1Q9Y271 337 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 ZNF835Q9Y2P0 537 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 ZNF257Q9Y2Q1 563 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 ADAMTS9Q9P2N4 1935 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 IGKV1-8A0A0C4DH67 115 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 SPAARA0A1B0GVQ0 90 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 CD300LBA8K4G0 201 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 M0R2Z0 102 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 BMPR1BO00238 502 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 SLC16A7O60669 478 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 BRI3O95415 125 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 MT-ATP6P00846 226 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 COX8AP10176 69 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 PMP22Q01453 160 aa6.64□□□□□ -1.35
CDKL5-211ENST00000637881 SRSF6Q13247 344 aaKnown RBP6.64□□□□□ -1.35
CDKL5-211ENST00000637881 CEACAM21Q3KPI0 293 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms