RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 RHOVQ96L33 236 aa15.61■□□□□ 0.09
CACNA1A-247ENST00000637769 MPV17P39210 176 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 TMEM170BQ5T4T1 132 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 BEX4Q9NWD9 120 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 ST6GALNAC2Q9UJ37 374 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 TSPAN2O60636 221 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 PAX1P15863 534 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 HOXA5P20719 270 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 LINC00469Q8N7U9 141 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 TREM2Q9NZC2 230 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 COX6B1P14854 86 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 FAM209BQ5JX69 171 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 ARL6IP6Q8N6S5 226 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 ZNF418Q8TF45 676 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 SPANXA1Q9NS26 97 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 DUX5Q96PT3 197 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 MED13Q9UHV7 2174 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 A0A0G2JLM5 398 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 LINC01549A6NIU2 74 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 UCP3P55916 312 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 GGACTQ9BVM4 153 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 LINC00470Q9BZP3 86 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 LINC01555Q8NAE3 123 aa15.6■□□□□ 0.09
CACNA1A-247ENST00000637769 A0A1B0GTH9 108 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 MPZL1O95297 269 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 KIAA0040Q15053 153 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 SDHCQ99643 169 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 UBR3Q6ZT12 1888 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 LCN2P80188 198 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 NGFRP08138 427 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 F11RQ9Y624 299 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 SCN10AQ9Y5Y9 1956 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 TNFRSF9Q07011 255 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 PARLQ9H300 379 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 ZNF71Q9NQZ8 489 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 PRSS23O95084 383 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 CITED2Q99967 270 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 PRR14LQ5THK1 2151 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 ZNF688P0C7X2 276 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 LINC01559Q495D7 138 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 HIKESHIQ53FT3 197 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 CBLN3Q6UW01 205 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 FMC1Q96HJ9 113 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 RBM38Q9H0Z9 239 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 FLRT3Q9NZU0 649 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 NPIPB8E9PQR5 432 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 NPIPB9F8W1W9 429 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 NPIPB7O75200 414 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 ARF6P62330 175 aa15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 SRSF12Q8WXF0 261 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-247ENST00000637769 ZFP36L2P47974 494 aaKnown RBP15.58■□□□□ 0.09
CACNA1A-247ENST00000637769 ZP4Q12836 540 aa15.58■□□□□ 0.09
CACNA1A-247ENST00000637769 AURKAIP1Q9NWT8 199 aaPredicted RBP15.58■□□□□ 0.09
CACNA1A-247ENST00000637769 SPG11Q96JI7 2443 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 VSIG8P0DPA2 414 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 G6PC2Q9NQR9 355 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 DCTN5Q9BTE1 182 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 YAE1D1Q9NRH1 226 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 PGPA6NDG6 321 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 MALP21145 153 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 C1orf185Q5T7R7 199 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 DTX2Q86UW9 622 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 TMEM160Q9NX00 188 aa15.58■□□□□ 0.08
CACNA1A-247ENST00000637769 PRR33A8MZF0 331 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 TMEM186Q96B77 213 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 ELF5Q9UKW6 265 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 SSTR5P35346 364 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 FAM74A4Q5TZK3 123 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 TTC9CQ8N5M4 171 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 DEFB124Q8NES8 71 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 NDUFS8O00217 210 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 PLNP26678 52 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 NXPH1P58417 271 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 UCP2P55851 309 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 CFAP161Q6P656 301 aa15.57■□□□□ 0.08
CACNA1A-247ENST00000637769 NKX2-8O15522 239 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 ACSF3Q4G176 576 aaPredicted RBP15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 SMIM8Q96KF7 97 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 AMER3Q8N944 861 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 IGHV3OR15-7A0A075B7D8 119 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 A0A1B0GWB2 263 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 SLC25A53Q5H9E4 307 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 SDF2L1Q9HCN8 221 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 NYNRINQ9P2P1 1898 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 PF4P02776 101 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 CCL27Q9Y4X3 112 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 SPCS1Q9Y6A9 102 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 GATAD1Q8WUU5 269 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 TMEM131Q92545 1883 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 A0A1B0GUT8 65 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 SPEM2Q0P670 501 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 UNQ5815/PRO19632Q6UWF5 114 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 HILPDAQ9Y5L2 63 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 USF3Q68DE3 2245 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 AGFG2O95081 481 aa15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 MRPS18AQ9NVS2 196 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-247ENST00000637769 IGKV3D-15A0A087WSY6 115 aa15.55■□□□□ 0.08
CACNA1A-247ENST00000637769 IGKV3-15P01624 115 aa15.55■□□□□ 0.08
CACNA1A-247ENST00000637769 HSPE1P61604 102 aaKnown RBP15.55■□□□□ 0.08
CACNA1A-247ENST00000637769 ZNF488Q96MN9 340 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms