RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 J3QRK9 145 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 HLA-DQB1P01920 261 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 PRH1P02810 166 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 SAA1P0DJI8 122 aaPredicted RBP14.02□□□□□ -0.17
CLN6-220ENST00000637450 HSPA13P48723 471 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 RHOGP84095 191 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 ZNF45Q02386 682 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 ATP5G2Q06055 141 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 CDK10Q15131 360 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 ZFAND6Q6FIF0 208 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 C22orf42Q6IC83 251 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 GTSCR1Q86UQ5 136 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 FAM223AQ8IWN6 122 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 TTC9CQ8N5M4 171 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 ZNF645Q8N7E2 425 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 ISOC1Q96CN7 298 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 CNBD2Q96M20 576 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 SPIN2AQ99865 258 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 SPIN2BQ9BPZ2 258 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 ST6GALNAC5Q9BVH7 336 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 VCX3BQ9H321 246 aa14.02□□□□□ -0.17
CLN6-220ENST00000637450 BMPR1BO00238 502 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 AIREO43918 545 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 FCGR3BO75015 233 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 CTXN2P0C2S0 81 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 HACD4Q5VWC8 232 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 IZUMO2Q6UXV1 221 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 MMD2Q8IY49 270 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 OR2K2Q8NGT1 345 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 DCSTAMPQ9H295 470 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 TUBA4BQ9H853 241 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 GAR1Q9NY12 217 aaKnown RBP14.01□□□□□ -0.17
CLN6-220ENST00000637450 PEMTQ9UBM1 199 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 OR2W1Q9Y3N9 320 aa14.01□□□□□ -0.17
CLN6-220ENST00000637450 EPPK1P58107 5090 aaKnown RBP14.01□□□□□ -0.17
CLN6-220ENST00000637450 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14□□□□□ -0.17
CLN6-220ENST00000637450 LCE6AA0A183 80 aa14□□□□□ -0.17
CLN6-220ENST00000637450 CREBL2O60519 120 aaPredicted RBP14□□□□□ -0.17
CLN6-220ENST00000637450 SLC22A5O76082 557 aa14□□□□□ -0.17
CLN6-220ENST00000637450 ACTL6BO94805 426 aa14□□□□□ -0.17
CLN6-220ENST00000637450 IGLV2-14P01704 120 aa14□□□□□ -0.17
CLN6-220ENST00000637450 NFYAP23511 347 aaPredicted RBP14□□□□□ -0.17
CLN6-220ENST00000637450 RPL30P62888 115 aaKnown RBP14□□□□□ -0.17
CLN6-220ENST00000637450 EXOSC2Q13868 293 aaKnown RBP14□□□□□ -0.17
CLN6-220ENST00000637450 DCUN1D5Q9BTE7 237 aa14□□□□□ -0.17
CLN6-220ENST00000637450 RBMX2Q9Y388 322 aaKnown RBP14□□□□□ -0.17
CLN6-220ENST00000637450 PRELID3BQ9Y3B1 194 aa14□□□□□ -0.17
CLN6-220ENST00000637450 NOTOA8MTQ0 251 aa13.99□□□□□ -0.17
CLN6-220ENST00000637450 TUSC2O75896 110 aa13.99□□□□□ -0.17
CLN6-220ENST00000637450 C10orf55Q5SWW7 151 aa13.99□□□□□ -0.17
CLN6-220ENST00000637450 CNIH2Q6PI25 160 aa13.99□□□□□ -0.17
CLN6-220ENST00000637450 ADAMTSL5Q6ZMM2 481 aa13.99□□□□□ -0.17
CLN6-220ENST00000637450 KCTD9Q7L273 389 aa13.99□□□□□ -0.17
CLN6-220ENST00000637450 NECAP1Q8NC96 275 aa13.99□□□□□ -0.17
CLN6-220ENST00000637450 IGKV1D-13A0A0B4J2D9 117 aa13.98□□□□□ -0.17
CLN6-220ENST00000637450 SMIM30A4D0T7 59 aa13.98□□□□□ -0.17
CLN6-220ENST00000637450 IGKV1-13P0DP09 117 aa13.98□□□□□ -0.17
CLN6-220ENST00000637450 CD36P16671 472 aa13.98□□□□□ -0.17
CLN6-220ENST00000637450 FGF9P31371 208 aaPredicted RBP13.98□□□□□ -0.17
CLN6-220ENST00000637450 SLC25A42Q86VD7 318 aa13.98□□□□□ -0.17
CLN6-220ENST00000637450 OR51E2Q9H255 320 aa13.98□□□□□ -0.17
CLN6-220ENST00000637450 TXNL4BQ9NX01 149 aaKnown RBP13.98□□□□□ -0.17
CLN6-220ENST00000637450 MRPS7Q9Y2R9 242 aaKnown RBP13.98□□□□□ -0.17
CLN6-220ENST00000637450 DMRT1Q9Y5R6 373 aa13.98□□□□□ -0.17
CLN6-220ENST00000637450 ZNF785A8K8V0 405 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 TEX22C9J3V5 150 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 MRPS14O60783 128 aaKnown RBP13.97□□□□□ -0.17
CLN6-220ENST00000637450 OR2J3O76001 311 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 IFNA6P05013 189 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 EIF4EBP1Q13541 118 aaPredicted RBP13.97□□□□□ -0.17
CLN6-220ENST00000637450 C15orf32Q32M92 178 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 CD300EQ496F6 205 aaPredicted RBP13.97□□□□□ -0.17
CLN6-220ENST00000637450 OR2B11Q5JQS5 317 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 FAM209BQ5JX69 171 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 UBE2UQ5VVX9 321 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 LINC00322Q6ZN03 302 aaPredicted RBP13.97□□□□□ -0.17
CLN6-220ENST00000637450 VKORC1L1Q8N0U8 176 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 NUDCD2Q8WVJ2 157 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 KCTD12Q96CX2 325 aaKnown RBP13.97□□□□□ -0.17
CLN6-220ENST00000637450 HSD17B10Q99714 261 aaKnown RBP13.97□□□□□ -0.17
CLN6-220ENST00000637450 RAB26Q9ULW5 256 aa13.97□□□□□ -0.17
CLN6-220ENST00000637450 HYDINQ4G0P3 5121 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 BIRC6Q9NR09 4857 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 TMEM235A6NFC5 223 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 HMX3A6NHT5 357 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 SSX5O60225 188 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 IL6RP08887 468 aaPredicted RBP13.96□□□□□ -0.17
CLN6-220ENST00000637450 BRWD1-AS2P59051 145 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 GABARAPL2P60520 117 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 TPRA1Q86W33 373 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 LAX1Q8IWV1 398 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 PUSL1Q8N0Z8 303 aaKnown RBP13.96□□□□□ -0.17
CLN6-220ENST00000637450 OR4S2Q8NH73 311 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 VSTM2AQ8TAG5 236 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 OR2A7Q96R45 310 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 ANXA10Q9UJ72 324 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 ZNF257Q9Y2Q1 563 aa13.96□□□□□ -0.17
CLN6-220ENST00000637450 PLECQ15149 4684 aaKnown RBP13.95□□□□□ -0.18
CLN6-220ENST00000637450 E7EUB6 86 aa13.95□□□□□ -0.18
CLN6-220ENST00000637450 SCGNO76038 276 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms