RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	TBC1D28	Q2M2D7	210 aa		10.88	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.88	□□□□□ -0.67
CHRNA7-223	ENST00000637033	ACTL10	Q5JWF8	245 aa		10.88	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TMEM45B	Q96B21	275 aa		10.88	□□□□□ -0.67
CHRNA7-223	ENST00000637033	COQ2	Q96H96	371 aa		10.88	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PMS2P5	A8MQ11	134 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	CLDN14	O95500	239 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	GATA2	P23769	480 aa	Predicted RBP	10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PRAMEF5	Q5TYX0	476 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	KCNIP4	Q6PIL6	250 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	VN1R17P	Q8TDU5	208 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	IGKV3D-15	A0A087WSY6	115 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	CDKN1A	P38936	164 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	RAB4B	P61018	213 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	VHLL	Q6RSH7	139 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	OCC1	Q8TAD7	63 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	DUSP13	Q9UII6	198 aa		10.87	□□□□□ -0.67
CHRNA7-223	ENST00000637033	C9orf172	C9J069	976 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033		F6UZH7	168 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	SMPD2	O60906	423 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PRB4	P10163	310 aa	Predicted RBP	10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	KITLG	P21583	273 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	ZNF90	Q03938	601 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	MOB3B	Q86TA1	216 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	R3HDM4	Q96D70	268 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	SEPSECS	Q9HD40	501 aa	Known RBP	10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	BDP1	A6H8Y1	2624 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TTC28	Q96AY4	2481 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TMEM30CP	A0ZSE6	113 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TMEM250	H0YL14	139 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033		M0R1X1	148 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	MLNR	O43193	412 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	IER3	P46695	156 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	FXYD3	Q14802	87 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	DCAF10	Q5QP82	559 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	KLF14	Q8TD94	323 aa	Predicted RBP	10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	POLDIP2	Q9Y2S7	368 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	MDFIC2	A0A1B0GVS7	189 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033		A0A1W2PNU3	283 aa	Predicted RBP	10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	C15orf62	A8K5M9	175 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TFPI2	P48307	235 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	CATR1	Q13166	79 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	FBXW9	Q5XUX1	488 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	GBGT1	Q8N5D6	347 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	NHLRC2	Q8NBF2	726 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	MS4A5	Q9H3V2	200 aa		10.86	□□□□□ -0.67
CHRNA7-223	ENST00000637033	FOXF2	Q12947	444 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	C21orf62-AS1	Q17RA5	79 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	ZNRF1	Q8ND25	227 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	BCL2L2	Q92843	193 aa	Predicted RBP	10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PYGO2	Q9BRQ0	406 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	LINC00470	Q9BZP3	86 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	HCFC1	P51610	2035 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TIMM8A	O60220	97 aa	Predicted RBP	10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	IGHV3-48	P01763	117 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	IQCJ	Q1A5X6	159 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	SFRP2	Q96HF1	295 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	HSPB9	Q9BQS6	159 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	ZNRD1	Q9P1U0	126 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	NAGK	Q9UJ70	344 aa		10.85	□□□□□ -0.67
CHRNA7-223	ENST00000637033	RNF212B	A8MTL3	300 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	SS18L1	O75177	396 aa	Predicted RBP	10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	DUSP3	P51452	185 aa	Predicted RBP	10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	BAGE3	Q86Y29	109 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	BAGE2	Q86Y30	109 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	OR4A16	Q8NH70	328 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PKIB	Q9C010	78 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	GCM1	Q9NP62	436 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	RYDEN	Q9NUL5	291 aa	Known RBP	10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	SPRR3	Q9UBC9	169 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	CACNA1H	O95180	2353 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	RELN	P78509	3460 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PLXNB1	O43157	2135 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TRBV6-6	A0A0A6YYG2	114 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	AHRR	A9YTQ3	701 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	LAMTOR5	O43504	91 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PROP1	O75360	226 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	IGHE	P01854	428 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	GPR12	P47775	334 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	NUTF2	P61970	127 aa	Known RBP	10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	HES3	Q5TGS1	186 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	LHFPL4	Q7Z7J7	247 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	DEFB108B	Q8NET1	73 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	ANAPC16	Q96DE5	110 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	C2orf88	Q9BSF0	95 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	SAMD10	Q9BYL1	202 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	MRPL37	Q9BZE1	423 aa	Known RBP	10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	PARD6A	Q9NPB6	346 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	MBNL3	Q9NUK0	354 aa	Known RBP	10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	YLPM1	P49750	1951 aa	Known RBP	10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TRAV34	A0A0B4J273	112 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	MKRN2OS	H3BPM6	223 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	TGOLN2	O43493	480 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	SERF1A	O75920	110 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	GCG	P01275	180 aa		10.84	□□□□□ -0.67
CHRNA7-223	ENST00000637033	OR10J4	P0C629	311 aa		10.84	□□□□□ -0.67

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