RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	ELF5	Q9UKW6	265 aa	Predicted RBP	5.61	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ALMS1	Q8TCU4	4167 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022		A0A075B6Q4	140 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TMEM238L	A0A1B0GVL6	79 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	LINC00473	A8K010	186 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RBMXL2	O75526	392 aa	Known RBP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CNIH1	O95406	144 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IGLV1-51	P01701	117 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	FRMD6-AS1	P0C7T7	363 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RAB3B	P20337	219 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	GADD45A	P24522	165 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CD40LG	P29965	261 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	DUT	P33316	252 aa	Known RBP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	HSPA13	P48723	471 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	EIF2B2	P49770	351 aa	Known RBP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	POLR2G	P62487	172 aa	Known RBP eCLIP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MRPS15	P82914	257 aa	Known RBP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	PITPNA	Q00169	270 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TAGLN	Q01995	201 aa	Known RBP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	KLF5	Q13887	457 aa	Predicted RBP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	C22orf42	Q6IC83	251 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IDO2	Q6ZQW0	420 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OVCH2	Q7RTZ1	564 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	HAPLN4	Q86UW8	402 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022		Q8N1Y9	231 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	BVES	Q8NE79	360 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR6Q1	Q8NGQ2	317 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CNBD2	Q96M20	576 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	HARBI1	Q96MB7	349 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TMEM68	Q96MH6	324 aa		5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.6	□□□□□ -1.51
CACNA1A-222	ENST00000636022		A0A0G2JLM5	398 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	C13orf42	A0A1B0GVH6	325 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	METTL21EP	A6NDL7	271 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MSGN1	A6NI15	193 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	C3orf84	H3BNL1	204 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SHOX	O15266	292 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MRPS14	O60783	128 aa	Known RBP	5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IGLV2-14	P01704	120 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RRAS	P10301	218 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ZP3	P21754	424 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	DTYMK	P23919	212 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MYL9	P24844	172 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	FGF9	P31371	208 aa	Predicted RBP	5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RCVRN	P35243	200 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	GABARAPL2	P60520	117 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	UBE2K	P61086	200 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	DEFA5	Q01523	94 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	REL	Q04864	619 aa	Predicted RBP	5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	DYRK1A	Q13627	763 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	PRSS8	Q16651	343 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RTL8B	Q17RB0	113 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	UBE2U	Q5VVX9	321 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ZNF343	Q6P1L6	599 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CENPS	Q8N2Z9	138 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TEX45	Q8NA69	505 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ADAD2	Q8NCV1	583 aa	Known RBP	5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ADTRP	Q96IZ2	230 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RCHY1	Q96PM5	261 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OR4C12	Q96R67	309 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	GINS4	Q9BRT9	223 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RANGRF	Q9HD47	186 aa	Predicted RBP	5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ZNF355P	Q9NSJ1	428 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ADAM30	Q9UKF2	790 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RAB26	Q9ULW5	256 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	STUB1	Q9UNE7	303 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TMA7	Q9Y2S6	64 aa	Known RBP	5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CEPT1	Q9Y6K0	416 aa		5.59	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SMIM30	A4D0T7	59 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022		A8MZ25	164 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	TRBV12-3	P01733	135 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	HLA-DQB1	P01920	261 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	AADAC	P22760	399 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	TALDO1	P37837	337 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	SYNJ2BP	P57105	145 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	RPL30	P62888	115 aa	Known RBP	5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	ARFRP1	Q13795	201 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	ARL6IP1	Q15041	203 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	CDNF	Q49AH0	187 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	HACD4	Q5VWC8	232 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	ZNF645	Q8N7E2	425 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	OR9G4	Q8NGQ1	327 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	OSR1	Q8TAX0	266 aa	Predicted RBP	5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	CHAC2	Q8WUX2	184 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	BORCS5	Q969J3	196 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	USMG5	Q96IX5	58 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	TM2D3	Q9BRN9	247 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	THAP7	Q9BT49	309 aa	Predicted RBP	5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	ELOVL1	Q9BW60	279 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	ATG5	Q9H1Y0	275 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	DCSTAMP	Q9H295	470 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	ZNF430	Q9H8G1	570 aa	Predicted RBP	5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	C19orf73	Q9NVV2	129 aa		5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	TXNL4B	Q9NX01	149 aa	Known RBP	5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	PEF1	Q9UBV8	284 aa	Known RBP	5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	RBM7	Q9Y580	266 aa	Known RBP	5.58	□□□□□ -1.52
CACNA1A-222	ENST00000636022	TRAV6	A0A075B6T7	132 aa		5.57	□□□□□ -1.52
CACNA1A-222	ENST00000636022	TRBV9	A0A0B4J1U6	114 aa		5.57	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms