RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 LNP1A1A4G5 178 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 FCN1O00602 326 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 CXCL12P48061 93 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 LGALS4P56470 323 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 TMPRSS3P57727 454 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 TDRG1Q3Y452 100 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 COX19Q49B96 90 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 MCEMP1Q8IX19 187 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 RNF2Q99496 336 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 GNB1LQ9BYB4 327 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 GP6Q9HCN6 339 aa12.36□□□□□ -0.43
CACNA1A-220ENST00000635988 CDIPTO14735 213 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 MT-ND6P03923 174 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 CD33P20138 364 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 PLGLB1Q02325 96 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 GABRA6Q16445 453 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 RPEL1Q2QD12 228 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 SPINK9Q5DT21 86 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 C11orf52Q96A22 123 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 UHRF2Q96PU4 802 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 MMP23AO75900 390 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 CDKN1AP38936 164 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 MRPL49Q13405 166 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 ZNF718Q3SXZ3 478 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 SPATA46Q5T0L3 261 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 TREML4Q6UXN2 200 aa12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-220ENST00000635988 ZNF891A8MT65 544 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 K7ESF4 209 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 NTN3O00634 580 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 THBS3P49746 956 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 RPL31P62899 125 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 MRPS11P82912 194 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 TBC1D28Q2M2D7 210 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 GGTLC1Q9BX51 225 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 ZFP30Q9Y2G7 519 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 CACNA1EQ15878 2313 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 TRGV10A0A0A0MS01 117 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 PSPNO60542 156 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 OR5I1Q13606 314 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 DCAF12Q5T6F0 453 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 WDR73Q6P4I2 378 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 OR2M7Q8NG81 312 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 OR52E5Q8NH55 327 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 OPN3Q9H1Y3 402 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 HES4Q9HCC6 221 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 ARHGAP21Q5T5U3 1957 aa12.34□□□□□ -0.43
CACNA1A-220ENST00000635988 LAMA1P25391 3075 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 GCHFRP30047 84 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 IER3P46695 156 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 BATFQ16520 125 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 OR10J3Q5JRS4 329 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 LRP11Q86VZ4 500 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 MMD2Q8IY49 270 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 MGST2Q99735 147 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 LRFN3Q9BTN0 628 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 LINC00473A8K010 186 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 GPX1P07203 203 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 HNF1AP20823 631 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 COMPP49747 757 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 RHOBP62745 196 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 HTD2P86397 168 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 SSPNQ14714 243 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 HLA-DRB5Q30154 266 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 KRTCAP3Q53RY4 240 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 ZNF766Q5HY98 468 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 SPINK14Q6IE38 97 aa12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 HEYLQ9NQ87 328 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-220ENST00000635988 SAA2-SAA4A0A096LPE2 208 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 SLC17A3O00476 420 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 SELEP16581 610 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 DUSP3P51452 185 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 MIC13Q5XKP0 118 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 MDP1Q86V88 176 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 C1orf174Q8IYL3 243 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 OR4A16Q8NH70 328 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 BCL2L2Q92843 193 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 EAF1Q96JC9 268 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 ZNF576Q9H609 170 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 SLC45A2Q9UMX9 530 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 ARL2-SNX15V9GYD0 113 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 DIRC3C9JPN6 131 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 K7EN84 100 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 OR9G9P0C7N8 305 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 AREGP15514 252 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 GABRA2P47869 451 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 SUMO1P63165 101 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 AESQ08117 197 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 PRAMEF5Q5TYX0 476 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 PRAMEF6Q5VXH4 476 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 SFXN3Q9BWM7 321 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 MS4A5Q9H3V2 200 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 NPVFQ9HCQ7 196 aa12.32□□□□□ -0.44
CACNA1A-220ENST00000635988 FREM1Q5H8C1 2179 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 GRPP07492 148 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 OR10J4P0C629 311 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 RAB7AP51149 207 aa12.31□□□□□ -0.44
CACNA1A-220ENST00000635988 KRTDAPP60985 99 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms