RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 ZNRD1Q9P1U0 126 aa1.91□□□□□ -2.1
SCN8A-210ENST00000627665 RPS6KB2Q9UBS0 482 aa1.91□□□□□ -2.1
SCN8A-210ENST00000627665 PRO0628Q9UI54 55 aa1.91□□□□□ -2.1
SCN8A-210ENST00000627665 SLC22A14Q9Y267 594 aa1.91□□□□□ -2.1
SCN8A-210ENST00000627665 PUS1Q9Y606 427 aaKnown RBP eCLIP1.91□□□□□ -2.1
SCN8A-210ENST00000627665 CSMD3Q7Z407 3707 aa1.91□□□□□ -2.1
SCN8A-210ENST00000627665 HUWE1Q7Z6Z7 4374 aaKnown RBP1.91□□□□□ -2.1
SCN8A-210ENST00000627665 A0A087X0T9 212 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 IGHV3-15A0A0B4J1V0 119 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 TRAV40A0A0B4J280 105 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 IGHV1-18A0A0C4DH31 117 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 KRBOX1C9JBD0 128 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 CLDN25C9JDP6 229 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 M0R1X1 148 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 ITGB1BP1O14713 200 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 TRAF3IP2O43734 574 aaPredicted RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 RAB36O95755 333 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 TRBV12-3P01733 135 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 IGHV3-11P01762 117 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 APCSP02743 223 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 MRPL3P09001 348 aaKnown RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 FAM228BP0C875 321 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 HLA-GP17693 338 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 PVALBP20472 110 aaPredicted RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 MAGEA6P43360 314 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 RAP1GDS1P52306 607 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 SLC18A1P54219 525 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 PITPNAQ00169 270 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 CDK5Q00535 292 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 CD164Q04900 197 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 BNIP2Q12982 314 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 TPBGQ13641 420 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 EPGNQ6UW88 154 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 Q6ZVH6 145 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 MKXQ8IYA7 352 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 SPICQ8N5J4 248 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 OR4M1Q8NGD0 313 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 OR52R1Q8NGF1 315 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 CASTOR1Q8WTX7 329 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 C15orf40Q8WUR7 153 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 RNF138Q8WVD3 245 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 EEF1AKMT1Q8WVE0 214 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 FLYWCH2Q96CP2 140 aaKnown RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 ZIM3Q96PE6 472 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 NDFIP1Q9BT67 221 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 CHAC1Q9BUX1 264 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 ZNF717Q9BY31 904 aaPredicted RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 MRPL20Q9BYC9 149 aaKnown RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 TBL1XR1Q9BZK7 514 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 SHCBP1LQ9BZQ2 653 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 C16orf95Q9H693 158 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 RHOFQ9HBH0 211 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 IFT46Q9NQC8 304 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 SPANXB1Q9NS25 103 aaPredicted RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 UBAP1Q9NZ09 502 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 USE1Q9NZ43 259 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 EMC3Q9P0I2 261 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 VAX2Q9UIW0 290 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 SIGLEC7Q9Y286 467 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 INSIG2Q9Y5U4 225 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 SOX21Q9Y651 276 aaPredicted RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 ENPP4Q9Y6X5 453 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 ARFGEF3Q5TH69 2177 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 NUP214P35658 2090 aaPredicted RBP1.9□□□□□ -2.11
SCN8A-210ENST00000627665 PLXNB1O43157 2135 aa1.9□□□□□ -2.11
SCN8A-210ENST00000627665 FRAS1Q86XX4 4008 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 PLCE1Q9P212 2302 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 SMIM23A6NLE4 172 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 KLLNB2CW77 178 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 NDUFC2-KCTD14E9PQ53 114 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 BPY2O14599 106 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 PLIN3O60664 434 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 ENTPD6O75354 484 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 NDUFS6O75380 124 aaKnown RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 MRPL33O75394 65 aaKnown RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 IGHMP01871 453 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CDK1P06493 297 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 S100A6P06703 90 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 SNRPAP09012 282 aaKnown RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CECR9P0C854 216 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 OCM2P0CE71 109 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CPMP14384 443 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 ATF1P18846 271 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 ELK4P28324 431 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 RPS10P46783 165 aaKnown RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 EVX1P49640 407 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 NUDT2P50583 147 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CCR6P51684 374 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CRISP3P54108 245 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 PSPHP78330 225 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 SLC35A2P78381 396 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 EMX1Q04741 257 aaPredicted RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 PRKCDQ05655 676 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 MED21Q13503 144 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 RAB31Q13636 194 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 PMVKQ15126 192 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 PLPPR5Q32ZL2 321 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms