RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SAMD5Q5TGI4 173 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 PYHIN1Q6K0P9 492 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 LPCAT3Q6P1A2 487 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 MRPL41Q8IXM3 137 aaKnown RBP13.06□□□□□ -0.32
UBE3D-208ENST00000626828 GRPEL2Q8TAA5 225 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 MYOZ3Q8TDC0 251 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 MOB3AQ96BX8 217 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 ABHD1Q96SE0 405 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 MIXL1Q9H2W2 232 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 CCDC59Q9P031 241 aaKnown RBP13.06□□□□□ -0.32
UBE3D-208ENST00000626828 VSIG4Q9Y279 399 aa13.06□□□□□ -0.32
UBE3D-208ENST00000626828 TNFSF12O43508 249 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 CREBL2O60519 120 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-208ENST00000626828 DUS4LO95620 317 aaKnown RBP13.05□□□□□ -0.32
UBE3D-208ENST00000626828 HRASP01112 189 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 BRWD1-AS2P59051 145 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 OXLD1Q5BKU9 147 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 OR2B11Q5JQS5 317 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 ETV3LQ6ZN32 361 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 ZNF818PQ6ZRF7 136 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 TMEM17Q86X19 198 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 LINC00482Q8N8I6 264 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 VSTM2AQ8TAG5 236 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 C4orf3Q8WVX3 66 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 FCAMRQ8WWV6 532 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 ISOC1Q96CN7 298 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 RCC1LQ96I51 464 aaKnown RBP13.05□□□□□ -0.32
UBE3D-208ENST00000626828 P2RX4Q99571 388 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 RABL2AQ9UBK7 228 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-208ENST00000626828 RABL2BQ9UNT1 228 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 CEPT1Q9Y6K0 416 aa13.05□□□□□ -0.32
UBE3D-208ENST00000626828 H3BMQ9 156 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 RBFOX2O43251 390 aaKnown RBP eCLIP13.04□□□□□ -0.32
UBE3D-208ENST00000626828 SOX15O60248 233 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 ACTL6BO94805 426 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 SSBP2P81877 361 aaPredicted RBP13.04□□□□□ -0.32
UBE3D-208ENST00000626828 MRGPRG-AS1Q2M3A8 158 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 MMD2Q8IY49 270 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 SPAG16Q8N0X2 631 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 POC5Q8NA72 575 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 OR52I2Q8NH67 350 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 CD300LFQ8TDQ1 290 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 RAX2Q96IS3 184 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 GPHA2Q96T91 129 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 KLK11Q9UBX7 282 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 MTFP1Q9UDX5 166 aa13.04□□□□□ -0.32
UBE3D-208ENST00000626828 MSGN1A6NI15 193 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 OR2A4O95047 310 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 HPRT1P00492 218 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 SAA1P0DJI8 122 aaPredicted RBP13.03□□□□□ -0.32
UBE3D-208ENST00000626828 IGLL1P15814 213 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 MRPS10P82664 201 aaKnown RBP13.03□□□□□ -0.32
UBE3D-208ENST00000626828 RUNX1Q01196 453 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 TNXAQ16473 311 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 BEAN1Q3B7T3 259 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 VAX1Q5SQQ9 334 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 KPRPQ5T749 579 aaPredicted RBP13.03□□□□□ -0.32
UBE3D-208ENST00000626828 IDO2Q6ZQW0 420 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 OR5T1Q8NG75 326 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 DIRAS2Q96HU8 199 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 RHOVQ96L33 236 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 OR2A7Q96R45 310 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 SLA2Q9H6Q3 261 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 ZNF430Q9H8G1 570 aaPredicted RBP13.03□□□□□ -0.32
UBE3D-208ENST00000626828 MEGF8Q7Z7M0 2845 aa13.03□□□□□ -0.32
UBE3D-208ENST00000626828 H3BUA1 57 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 GABARAPH6UMI1 98 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 GPR31O00270 319 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 PGLYRP1O75594 196 aaPredicted RBP13.02□□□□□ -0.33
UBE3D-208ENST00000626828 IFNA6P05013 189 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 AADACL3Q5VUY0 350 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 LAX1Q8IWV1 398 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 PUSL1Q8N0Z8 303 aaKnown RBP13.02□□□□□ -0.33
UBE3D-208ENST00000626828 OR11H1Q8NG94 326 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 TMEM167AQ8TBQ9 72 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 MS4A10Q96PG2 267 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 DUX3Q96PT4 197 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 PHB2Q99623 299 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 MCRIP2Q9BUT9 160 aaKnown RBP13.02□□□□□ -0.33
UBE3D-208ENST00000626828 ZNF355PQ9NSJ1 428 aa13.02□□□□□ -0.33
UBE3D-208ENST00000626828 CCDC160A6NGH7 325 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 I3L521 148 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 RAMP3O60896 148 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 BRI3O95415 125 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 TBPP20226 339 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 S100GP29377 79 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 MAS1LP35410 378 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 UCP3P55916 312 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 TAS2R31P59538 309 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 SSBP1Q04837 148 aaKnown RBP13.01□□□□□ -0.33
UBE3D-208ENST00000626828 RNASE12Q5GAN4 147 aaKnown RBP13.01□□□□□ -0.33
UBE3D-208ENST00000626828 RNASE10Q5GAN6 216 aaKnown RBP13.01□□□□□ -0.33
UBE3D-208ENST00000626828 VKORC1L1Q8N0U8 176 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 OR1N2Q8NGR9 330 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 OR51H1Q8NH63 302 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 SRSF12Q8WXF0 261 aaKnown RBP13.01□□□□□ -0.33
UBE3D-208ENST00000626828 SPIN2AQ99865 258 aa13.01□□□□□ -0.33
UBE3D-208ENST00000626828 SPIN2BQ9BPZ2 258 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms