RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 LDLRAD2Q5SZI1 272 aa11.27□□□□□ -0.61
PCDHB17P-202ENST00000623466 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
PCDHB17P-202ENST00000623466 APOBEC3DQ96AK3 386 aaPredicted RBP11.27□□□□□ -0.61
PCDHB17P-202ENST00000623466 ACY3Q96HD9 319 aa11.27□□□□□ -0.61
PCDHB17P-202ENST00000623466 ZNF391Q9UJN7 358 aa11.27□□□□□ -0.61
PCDHB17P-202ENST00000623466 TNFSF13O75888 250 aa11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 ORAOV1Q8WV07 137 aa11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 SPSB4Q96A44 273 aa11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 TMEM242Q9NWH2 141 aa11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 TRAV24A0A0B4J272 114 aa11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 PFN1P07737 140 aaKnown RBP11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 BMI1P35226 326 aa11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 Q6ZS49 121 aa11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 MRGPRGQ86SM5 289 aa11.26□□□□□ -0.61
PCDHB17P-202ENST00000623466 GRPP07492 148 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 CEBPDP49716 269 aaPredicted RBP11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM53AQ6NSI3 398 aaPredicted RBP11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 C20orf144Q9BQM9 153 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 LINC00470Q9BZP3 86 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 PKDREJQ9NTG1 2253 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 F6UZH7 168 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 IGLV2-14P01704 120 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 S100GP29377 79 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 FOXF2Q12947 444 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 LRRC75BQ2VPJ9 315 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 BSXQ3C1V8 233 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 CEACAM21Q3KPI0 293 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 VWA1Q6PCB0 445 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 OR10V1Q8NGI7 309 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 ZCCHC14Q8WYQ9 949 aaKnown RBP11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 PLCE1Q9P212 2302 aa11.25□□□□□ -0.61
PCDHB17P-202ENST00000623466 H7BYZ3 331 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 GALR1P47211 349 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 PDLIM4P50479 330 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 RPL23P62829 140 aaKnown RBP11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 TMEM183BQ1AE95 376 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 TMEM108Q6UXF1 575 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 WDR61Q9GZS3 305 aaKnown RBP11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 NAT8Q9UHE5 227 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 TRAV34A0A0B4J273 112 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 CLDN1O95832 211 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 CTXN2P0C2S0 81 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 EGR1P18146 543 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 MEF2BQ02080 365 aaPredicted RBP11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 MRPL49Q13405 166 aaKnown RBP11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 ZNF585BQ52M93 769 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 TMEM41BQ5BJD5 291 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 ACSM6Q6P461 480 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 ZNF826PQ6ZT77 177 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 LHFPL4Q7Z7J7 247 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 OR51G1Q8NGK1 321 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 OR4F5Q8NH21 305 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 VN1R17PQ8TDU5 208 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 TAF15Q92804 592 aaKnown RBP eCLIP11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 OR4F4Q96R69 305 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 HIPK2Q9H2X6 1198 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 ANKRD30BLA7E2S9 258 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 SIRPB1O00241 398 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 DLL1O00548 723 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 CDIPTO14735 213 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 IGHV1-2P23083 117 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 RNPS1Q15287 305 aaKnown RBP11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 ERASQ7Z444 233 aa11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 BCL2L2Q92843 193 aaPredicted RBP11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 ZNF430Q9H8G1 570 aaPredicted RBP11.24□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A10PA6NDY2 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A18PA6NE21 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A16PA6NEW6 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A20PA6NIJ5 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A8PA6NJQ4 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A7PA6NKC0 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A22PA8MWA6 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A12PA8MX19 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A5PA8MXJ8 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A23PA8MXZ1 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A15PP0C7V4 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A13PP0C7W8 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A14PP0C7W9 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM90A24PP0C7X0 464 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 HBG1P69891 147 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 HBG2P69892 147 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 SPINK9Q5DT21 86 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 TMEM170AQ8WVE7 144 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 PARLQ9H300 379 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 DLL3Q9NYJ7 618 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 IL19Q9UHD0 177 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 ARR3P36575 388 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FAM3BP58499 235 aaPredicted RBP11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 FBLN7Q53RD9 439 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 P2RX4Q99571 388 aa11.23□□□□□ -0.61
PCDHB17P-202ENST00000623466 NUPR1O60356 82 aa11.22□□□□□ -0.61
PCDHB17P-202ENST00000623466 IFNA1P01562 189 aa11.22□□□□□ -0.61
PCDHB17P-202ENST00000623466 NBL1P41271 181 aa11.22□□□□□ -0.61
PCDHB17P-202ENST00000623466 ZNF709Q8N972 641 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms