RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 RBMY1EA6NEQ0 496 aaKnown RBP17.95■□□□□ 0.46
CPSF1-214ENST00000622776 MFNGO00587 321 aa17.95■□□□□ 0.46
CPSF1-214ENST00000622776 RBMY1DP0C7P1 496 aaKnown RBP17.95■□□□□ 0.46
CPSF1-214ENST00000622776 GADD45AP24522 165 aa17.95■□□□□ 0.46
CPSF1-214ENST00000622776 H1FOOQ8IZA3 346 aaPredicted RBP17.95■□□□□ 0.46
CPSF1-214ENST00000622776 DYNLRB2Q8TF09 96 aa17.95■□□□□ 0.46
CPSF1-214ENST00000622776 SPIN2AQ99865 258 aa17.95■□□□□ 0.46
CPSF1-214ENST00000622776 SPIN2BQ9BPZ2 258 aa17.95■□□□□ 0.46
CPSF1-214ENST00000622776 RAB27BO00194 218 aa17.94■□□□□ 0.46
CPSF1-214ENST00000622776 ACTL6BO94805 426 aa17.94■□□□□ 0.46
CPSF1-214ENST00000622776 SAA1P0DJI8 122 aaPredicted RBP17.94■□□□□ 0.46
CPSF1-214ENST00000622776 HIST1H1DP16402 221 aaKnown RBP17.94■□□□□ 0.46
CPSF1-214ENST00000622776 DEFB114Q30KQ6 69 aa17.94■□□□□ 0.46
CPSF1-214ENST00000622776 TTC9CQ8N5M4 171 aa17.94■□□□□ 0.46
CPSF1-214ENST00000622776 NECAP1Q8NC96 275 aa17.94■□□□□ 0.46
CPSF1-214ENST00000622776 KCTD12Q96CX2 325 aaKnown RBP17.94■□□□□ 0.46
CPSF1-214ENST00000622776 ACOT13Q9NPJ3 140 aa17.94■□□□□ 0.46
CPSF1-214ENST00000622776 ALMS1Q8TCU4 4167 aa17.94■□□□□ 0.46
CPSF1-214ENST00000622776 RGS10O43665 173 aa17.93■□□□□ 0.46
CPSF1-214ENST00000622776 CREBL2O60519 120 aaPredicted RBP17.93■□□□□ 0.46
CPSF1-214ENST00000622776 CDK10Q15131 360 aa17.93■□□□□ 0.46
CPSF1-214ENST00000622776 C10orf55Q5SWW7 151 aa17.93■□□□□ 0.46
CPSF1-214ENST00000622776 MMD2Q8IY49 270 aa17.93■□□□□ 0.46
CPSF1-214ENST00000622776 CENPOQ9BU64 300 aa17.93■□□□□ 0.46
CPSF1-214ENST00000622776 WFDC10AQ9H1F0 79 aa17.93■□□□□ 0.46
CPSF1-214ENST00000622776 SRD5A3Q9H8P0 318 aa17.93■□□□□ 0.46
CPSF1-214ENST00000622776 IGKV1D-8A0A087WSZ0 117 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 ERICH4A6NGS2 130 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 C2orf70A6NJV1 201 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 OR11H12B2RN74 326 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 OR2J3O76001 311 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 TALDO1P37837 337 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 KIR2DS2P43631 304 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 ARFRP1Q13795 201 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 GUCA2BQ16661 112 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 C15orf32Q32M92 178 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 Q6ZS49 121 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 MGLLQ99685 303 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 DMRT1Q9Y5R6 373 aa17.92■□□□□ 0.46
CPSF1-214ENST00000622776 PPP5D1E7EU14 171 aa17.91■□□□□ 0.46
CPSF1-214ENST00000622776 FCGR3BO75015 233 aa17.91■□□□□ 0.46
CPSF1-214ENST00000622776 FOLR2P14207 255 aa17.91■□□□□ 0.46
CPSF1-214ENST00000622776 RAB6AP20340 208 aa17.91■□□□□ 0.46
CPSF1-214ENST00000622776 FAM209BQ5JX69 171 aa17.91■□□□□ 0.46
CPSF1-214ENST00000622776 SLC25A42Q86VD7 318 aa17.91■□□□□ 0.46
CPSF1-214ENST00000622776 DCUN1D5Q9BTE7 237 aa17.91■□□□□ 0.46
CPSF1-214ENST00000622776 ZC4H2Q9NQZ6 224 aa17.91■□□□□ 0.46
CPSF1-214ENST00000622776 J3QRK9 145 aa17.9■□□□□ 0.46
CPSF1-214ENST00000622776 PDCD5O14737 125 aa17.9■□□□□ 0.46
CPSF1-214ENST00000622776 HLA-AP01891 365 aaKnown RBP17.9■□□□□ 0.46
CPSF1-214ENST00000622776 EDN2P20800 178 aa17.9■□□□□ 0.46
CPSF1-214ENST00000622776 OR10A3P58181 314 aa17.9■□□□□ 0.46
CPSF1-214ENST00000622776 CCDC90BQ9GZT6 254 aa17.9■□□□□ 0.46
CPSF1-214ENST00000622776 TECRQ9NZ01 308 aaKnown RBP17.9■□□□□ 0.46
CPSF1-214ENST00000622776 HMX3A6NHT5 357 aa17.89■□□□□ 0.45
CPSF1-214ENST00000622776 IFITM5A6NNB3 132 aa17.89■□□□□ 0.45
CPSF1-214ENST00000622776 GGCTO75223 188 aaKnown RBP17.89■□□□□ 0.45
CPSF1-214ENST00000622776 OR2C1O95371 312 aa17.89■□□□□ 0.45
CPSF1-214ENST00000622776 MAP2K4P45985 399 aa17.89■□□□□ 0.45
CPSF1-214ENST00000622776 ZNF645Q8N7E2 425 aa17.89■□□□□ 0.45
CPSF1-214ENST00000622776 WDR89Q96FK6 387 aaPredicted RBP17.89■□□□□ 0.45
CPSF1-214ENST00000622776 ZNF257Q9Y2Q1 563 aa17.89■□□□□ 0.45
CPSF1-214ENST00000622776 PRELID3BQ9Y3B1 194 aa17.89■□□□□ 0.45
CPSF1-214ENST00000622776 TRAV1-2A0A0B4J238 106 aa17.88■□□□□ 0.45
CPSF1-214ENST00000622776 METTL21EPA6NDL7 271 aa17.88■□□□□ 0.45
CPSF1-214ENST00000622776 LGALS9O00182 355 aa17.88■□□□□ 0.45
CPSF1-214ENST00000622776 KCTD9Q7L273 389 aa17.88■□□□□ 0.45
CPSF1-214ENST00000622776 PRSS48Q7RTY5 328 aa17.88■□□□□ 0.45
CPSF1-214ENST00000622776 OR51E2Q9H255 320 aa17.88■□□□□ 0.45
CPSF1-214ENST00000622776 FBXL7Q9UJT9 491 aa17.88■□□□□ 0.45
CPSF1-214ENST00000622776 ELF5Q9UKW6 265 aaPredicted RBP17.88■□□□□ 0.45
CPSF1-214ENST00000622776 TEX22C9J3V5 150 aa17.87■□□□□ 0.45
CPSF1-214ENST00000622776 DTYMKP23919 212 aa17.87■□□□□ 0.45
CPSF1-214ENST00000622776 AQP4P55087 323 aa17.87■□□□□ 0.45
CPSF1-214ENST00000622776 RPL30P62888 115 aaKnown RBP17.87■□□□□ 0.45
CPSF1-214ENST00000622776 OR2B11Q5JQS5 317 aa17.87■□□□□ 0.45
CPSF1-214ENST00000622776 C19orf35Q6ZS72 473 aa17.87■□□□□ 0.45
CPSF1-214ENST00000622776 VKORC1L1Q8N0U8 176 aa17.87■□□□□ 0.45
CPSF1-214ENST00000622776 MRPS7Q9Y2R9 242 aaKnown RBP17.87■□□□□ 0.45
CPSF1-214ENST00000622776 RBMX2Q9Y388 322 aaKnown RBP17.87■□□□□ 0.45
CPSF1-214ENST00000622776 OR2W1Q9Y3N9 320 aa17.87■□□□□ 0.45
CPSF1-214ENST00000622776 IL6RP08887 468 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-214ENST00000622776 CRHBPP24387 322 aa17.86■□□□□ 0.45
CPSF1-214ENST00000622776 GPHB5Q86YW7 130 aa17.86■□□□□ 0.45
CPSF1-214ENST00000622776 DPPA5A6NC42 116 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 NPIPB5A8MRT5 1133 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 HLA-DQB1P01920 261 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 CD36P16671 472 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 CBLN1P23435 193 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 NFYAP23511 347 aaPredicted RBP17.85■□□□□ 0.45
CPSF1-214ENST00000622776 RPL27AP46776 148 aaKnown RBP17.85■□□□□ 0.45
CPSF1-214ENST00000622776 ARL6IP1Q15041 203 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 SSX1Q16384 188 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 SLC16A13Q7RTY0 426 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 CACNG8Q8WXS5 425 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 ST6GALNAC5Q9BVH7 336 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 ATG5Q9H1Y0 275 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 SELENOKQ9Y6D0 94 aa17.85■□□□□ 0.45
CPSF1-214ENST00000622776 E7EUB6 86 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 SLC22A5O76082 557 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms