RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 DMXL2Q8TDJ6 3036 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 CTXND1A0A1B0GTU2 59 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 IFNA1P01562 189 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 IFNA10P01566 189 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 CEACAM8P31997 349 aaPredicted RBP9.89□□□□□ -0.83
TP53-227ENST00000622645 ZNF674Q2M3X9 581 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 CT45A1Q5HYN5 189 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 WDR25Q64LD2 544 aaPredicted RBP9.89□□□□□ -0.83
TP53-227ENST00000622645 C1QL4Q86Z23 238 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 ZNF709Q8N972 641 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 CT45A3Q8NHU0 189 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 SIRT7Q9NRC8 400 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 GSN-AS1Q9NRJ2 163 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 RNF7Q9UBF6 113 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 HCFC1P51610 2035 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 ANKRD11Q6UB99 2663 aaPredicted RBP9.88□□□□□ -0.83
TP53-227ENST00000622645 CXorf65A6NEN9 183 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 RRHO14718 337 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 MDKP21741 143 aaPredicted RBP9.88□□□□□ -0.83
TP53-227ENST00000622645 CD40P25942 277 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 KIAA0141Q14154 515 aaPredicted RBP9.88□□□□□ -0.83
TP53-227ENST00000622645 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 Q8N7P7 452 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 PRSS33Q8NF86 280 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 FAM57AQ8TBR7 257 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 CCL13Q99616 98 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 SSX3Q99909 188 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 BSNQ9UPA5 3926 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 ACACAQ13085 2346 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 B4DEV8 164 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 CYB5BO43169 146 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 MBP02144 154 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 CD1BP29016 333 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 CCKARP32238 428 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 GATA4P43694 442 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 SELENOVP59797 346 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 RELBQ01201 579 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 ABHD12Q8N2K0 398 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 FAM216BQ8N7L0 139 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 RPUSD4Q96CM3 377 aaKnown RBP9.88□□□□□ -0.83
TP53-227ENST00000622645 SNRNP40Q96DI7 357 aaKnown RBP9.88□□□□□ -0.83
TP53-227ENST00000622645 HEYLQ9NQ87 328 aaPredicted RBP9.88□□□□□ -0.83
TP53-227ENST00000622645 TMEM140Q9NV12 185 aa9.88□□□□□ -0.83
TP53-227ENST00000622645 PTPRZ1P23471 2315 aaPredicted RBP9.87□□□□□ -0.83
TP53-227ENST00000622645 ADGRG4Q8IZF6 3080 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 SAA2-SAA4A0A096LPE2 208 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 KBTBD11-OT1A0A1B0GTJ5 212 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 SMCO3A2RU48 225 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 YIF1AO95070 293 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 SAA2P0DJI9 122 aaPredicted RBP9.87□□□□□ -0.83
TP53-227ENST00000622645 SPCS3P61009 180 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 ERVK-16P61578 105 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 PNRC1Q12796 327 aaPredicted RBP9.87□□□□□ -0.83
TP53-227ENST00000622645 C3orf36Q3SXR2 165 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 AARDQ4LEZ3 155 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 ZCCHC24Q8N2G6 241 aaKnown RBP9.87□□□□□ -0.83
TP53-227ENST00000622645 DDB2Q92466 427 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 SMIM7Q9BQ49 75 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 ACTR3CQ9C0K3 210 aaPredicted RBP9.87□□□□□ -0.83
TP53-227ENST00000622645 PIEZO2Q9H5I5 2752 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 RBFOX2O43251 390 aaKnown RBP eCLIP9.87□□□□□ -0.83
TP53-227ENST00000622645 MMP23AO75900 390 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 GYPAP02724 150 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 PSMB3P49720 205 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 CCL8P80075 99 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 PMS2P11Q13670 270 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 STUMQ69YW2 141 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 TCF23Q7RTU1 214 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 LYG1Q8N1E2 194 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 FAM222BQ8WU58 562 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 GFOD1Q9NXC2 390 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 IL19Q9UHD0 177 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 SH3BGRL2Q9UJC5 107 aa9.87□□□□□ -0.83
TP53-227ENST00000622645 TRAV38-1A0A0B4J264 116 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 GFRA3O60609 400 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 VDAC2P45880 294 aaPredicted RBP9.86□□□□□ -0.83
TP53-227ENST00000622645 GNG10P50151 68 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 KRTCAP3Q53RY4 240 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 OR4F5Q8NH21 305 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 SDSLQ96GA7 329 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 GAFA1Q96PS6 74 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 OR4F4Q96R69 305 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 MIOXQ9UGB7 285 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 WDR83OSQ9Y284 106 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 PCNX1Q96RV3 2341 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 TRGV10A0A0A0MS01 117 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 C17orf112F2Z3M2 114 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 CLDN34H7C241 214 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 PAGE4O60829 102 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 TRGC2P03986 189 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 NDUFA6P56556 154 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 ADIRFQ15847 76 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 TMEM170AQ8WVE7 144 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 ABHD17AQ96GS6 310 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 RHOVQ96L33 236 aa9.86□□□□□ -0.83
TP53-227ENST00000622645 A0A0G2JNJ9 132 aa9.85□□□□□ -0.83
TP53-227ENST00000622645 RAB7AP51149 207 aa9.85□□□□□ -0.83
TP53-227ENST00000622645 NUBP1P53384 320 aa9.85□□□□□ -0.83
TP53-227ENST00000622645 DOLPP1Q86YN1 238 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms