RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 LINC00052Q96N35 136 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 SLC35D1Q9NTN3 355 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 GSKIPQ9P0R6 139 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 TBL2Q9Y4P3 447 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 WNK2Q9Y3S1 2297 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 ASH1LQ9NR48 2969 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 MARCH11A6NNE9 402 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 OOSP1A8MZH6 123 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 H0YJW9 148 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 KRASP01116 189 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 IGKV1-5P01602 117 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 CXCL2P19875 107 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 PSMB6P28072 239 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 REG1BP48304 166 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 LGALS4P56470 323 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 KLRD1Q13241 179 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 DIAPH2-AS1Q14236 149 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 HSD17B13Q7Z5P4 300 aaPredicted RBP11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 PDPNQ86YL7 162 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 EIF4E3Q8N5X7 224 aaKnown RBP11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 COA4Q9NYJ1 87 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 ABCA2Q9BZC7 2435 aa11.52□□□□□ -0.56
CLTCL1-212ENST00000622493 IGHV1-3A0A0C4DH29 117 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 HRASP01112 189 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 PET100P0DJ07 73 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 G6PCP35575 357 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 ERVK-16P61578 105 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 BTN1A1Q13410 526 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 TPTE2P1Q5T6R2 138 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 OR4D5Q8NGN0 318 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 OR4C13Q8NGP0 309 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 OSR1Q8TAX0 266 aaPredicted RBP11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 LHX4Q969G2 390 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 GPR146Q96CH1 333 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 R3HDM4Q96D70 268 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 WASHC3Q9Y3C0 194 aa11.52□□□□□ -0.57
CLTCL1-212ENST00000622493 NBPF19A0A087WUL8 3843 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 A0A0G2JRQ6 117 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 H7C2Y5 167 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 NMBP08949 121 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 FGF2P09038 288 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 P0C879 139 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 SMCO1Q147U7 214 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 POU2AF1Q16633 256 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 TUSC1Q2TAM9 212 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 MIDNQ504T8 468 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 CCDC144NLQ6NUI1 221 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 C11orf87Q6NUJ2 197 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 H2BFWTQ7Z2G1 175 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 THAP6Q8TBB0 222 aa11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 FLYWCH2Q96CP2 140 aaKnown RBP11.51□□□□□ -0.57
CLTCL1-212ENST00000622493 J3QLI3 93 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 PITX3O75364 302 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 SLC25A4P12235 298 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 LRRC37A5PQ49AS3 106 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 TMEM177Q53S58 311 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 TMUB2Q71RG4 321 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 DMBX1Q8NFW5 382 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 MALSU1Q96EH3 234 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 C7orf69Q9H7B7 122 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 UNC79Q9P2D8 2635 aa11.5□□□□□ -0.57
CLTCL1-212ENST00000622493 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 CENPVL3A0A0U1RRI6 287 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 RLN2P04090 185 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 IGKV1-16P04430 117 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 NKX2-1P43699 371 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 RAB32Q13637 225 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 LDLRAD2Q5SZI1 272 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 PDZD9Q8IXQ8 264 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 OR1S1Q8NH92 325 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 RHOVQ96L33 236 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 CACNG5Q9UF02 275 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 CACFD1Q9UGQ2 172 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 VPS13CQ709C8 3753 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 A0A1W2PPI3 338 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 ST8SIA3O43173 380 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 IGHV4-31P0DP07 118 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 LGALS7P47929 136 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 ID3Q02535 119 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 HABP2Q14520 560 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 Q6ZRM9 215 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 LHFPL4Q7Z7J7 247 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 RNF5Q99942 180 aa11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-212ENST00000622493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.578e-8■■■□□ 16
CLTCL1-212ENST00000622493 FAM90A26D6RGX4 464 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 NPFFO15130 113 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 TGFAP01135 160 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 MBPP02686 304 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 LYL1P12980 280 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 CD1BP29016 333 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 PRSS54Q6PEW0 395 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 WFDC11Q8NEX6 87 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 CXorf58Q96LI9 332 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 POMT1Q9Y6A1 747 aa11.48□□□□□ -0.57
CLTCL1-212ENST00000622493 CR1P17927 2039 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms