RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 ETV3LQ6ZN32 361 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 OR2T10Q8NGZ9 312 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 CACFD1Q9UGQ2 172 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 OR2A4O95047 310 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 IGHV2-5P01817 119 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 PRTN3P24158 256 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 C17orf58Q2M2W7 97 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 CYB5R2Q6BCY4 276 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 PCNPQ8WW12 178 aaKnown RBP10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 TMEM230Q96A57 120 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 OR2A7Q96R45 310 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 BEX4Q9NWD9 120 aaPredicted RBP10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 COA4Q9NYJ1 87 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 UBQLN2Q9UHD9 624 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 KPTNQ9Y664 436 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 DUTP33316 252 aaKnown RBP10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 ZNF266Q14584 549 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 C10orf105Q8TEF2 133 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 ST6GAL2Q96JF0 529 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 PITPNC1Q9UKF7 332 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 ACANP16112 2415 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 TXNL1O43396 289 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 SNRNP70P08621 437 aaKnown RBP10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 RPL27AP46776 148 aaKnown RBP10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 HLA-DRB5Q30154 266 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 M0R1W7 72 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 DFFBO76075 338 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 RPL30P62888 115 aaKnown RBP10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 Q71RC1 249 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 TEX29Q8N6K0 151 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 DUX5Q96PT3 197 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 IGHV3-21A0A0B4J1V1 117 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 A0A1W2PPV4 95 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 ZFP92A6NM28 416 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 FOXI3A8MTJ6 420 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 UCP1P25874 307 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 SCGB2A2Q13296 93 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 DHRS7BQ6IAN0 325 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 HCP5Q6MZN7 132 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 CHAC2Q8WUX2 184 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 GALNT14Q96FL9 552 aa10.25□□□□□ -0.77
SCAMP1-207ENST00000621999 A0A0B4J293 547 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 MPTX1A8MV57 137 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 LGALS7P47929 136 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 H2BFSP57053 126 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 UBE2KP61086 200 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 PRSS54Q6PEW0 395 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 MMD2Q8IY49 270 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 ELLP55199 621 aaPredicted RBP10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 OR2F1Q13607 317 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 Q6ZS49 121 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 LDLRAD3Q86YD5 345 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 TCTE3Q8IZS6 198 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 NMES1Q9C002 83 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 TRAV20A0A0B4J274 112 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 IGHV2-70DA0A0C4DH43 119 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 A0A1W2PN81 502 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 AGPAT2O15120 278 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 CHRNA7P36544 502 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 C2orf68Q2NKX9 166 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 LHFPL4Q7Z7J7 247 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 OR5C1Q8NGR4 320 aa10.24□□□□□ -0.77
SCAMP1-207ENST00000621999 CFAP46Q8IYW2 2715 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 DUXBA0A1W2PPF3 345 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 KRTAP10-9P60411 292 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 RND3P61587 244 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 DCHS1Q96JQ0 3298 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 KBTBD11O94819 623 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 THNSL2Q86YJ6 484 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 STOML3Q8TAV4 291 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 PBDC1Q9BVG4 233 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 PLSCR3Q9NRY6 295 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 C15orf65H3BRN8 121 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 REG1AP05451 166 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 SAA4P35542 130 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 C11orf71Q6IPW1 123 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 SLC25A48Q6ZT89 311 aaKnown RBP10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 OSR1Q8TAX0 266 aaPredicted RBP10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 LRRC20Q8TCA0 184 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 ATMQ13315 3056 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 UBE2L5PA0A1B0GUS4 154 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 LINC00473A8K010 186 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 BUB1B-PAK6H3BSN5 160 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 OR4A47Q6IF82 309 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 PDPNQ86YL7 162 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 TNFRSF14Q92956 283 aa10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 SEBOXQ9HB31 216 aaPredicted RBP10.23□□□□□ -0.77
SCAMP1-207ENST00000621999 NPFFO15130 113 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 ACSM6Q6P461 480 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 MTORP42345 2549 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 SETD2Q9BYW2 2564 aaPredicted RBP10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 MBPP02686 304 aaPredicted RBP10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 RBP4P02753 201 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 ZNF134P52741 427 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 SLC38A11Q08AI6 406 aa10.22□□□□□ -0.77
SCAMP1-207ENST00000621999 SLC51BQ86UW2 128 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms