RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 ZNF16P17020 682 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 TUBG1P23258 451 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 COL8A2P25067 703 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 S100PP25815 95 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CCKARP32238 428 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CEBPGP53567 150 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TMPRSS3P57727 454 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 UBE2NP61088 152 aaKnown RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 RPL15P61313 204 aaKnown RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 GNB2P62879 340 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 ARG2P78540 354 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 RELBQ01201 579 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TGFBR3Q03167 851 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TLE1Q04724 770 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CATR1Q13166 79 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 RTP5Q14D33 572 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 POU2AF1Q16633 256 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 PRSS8Q16651 343 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 C17orf58Q2M2W7 97 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 SMIM21Q3B7S5 101 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 BSXQ3C1V8 233 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 ZNF718Q3SXZ3 478 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 SPINK9Q5DT21 86 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 GCSAMLQ5JQS6 135 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 FFAR4Q5NUL3 377 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TMEM164Q5U3C3 297 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 OR8G2PQ6IF36 304 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TRAT1Q6PIZ9 186 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 DUX4L9Q6RFH8 374 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 IGF2-ASQ6U949 168 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 TMEM144Q7Z5S9 345 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 LRP11Q86VZ4 500 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CXorf67Q86X51 503 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 TGIF2LYQ8IUE0 185 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 GCSAMQ8N6F7 178 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 ZNF114Q8NC26 417 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 FDCSPQ8NFU4 85 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 OR51G1Q8NGK1 321 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 OR4X1Q8NH49 305 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 MBD3L2Q8NHZ7 208 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 SCGB1C1Q8TD33 95 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 LRRC29Q8WV35 223 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 RAB1CQ92928 201 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 RAB24Q969Q5 203 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 GALMQ96C23 342 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 R3HDM4Q96D70 268 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 STARD4Q96DR4 205 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 NEIL1Q96FI4 390 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 CIB3Q96Q77 187 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 TRIB1Q96RU8 372 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 HSD17B10Q99714 261 aaKnown RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 MGST2Q99735 147 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 HIST1H2BLQ99880 126 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 GGTLC1Q9BX51 225 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 GPR61Q9BZJ8 451 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 BCL2L14Q9BZR8 327 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CTDSP1Q9GZU7 261 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 OPN3Q9H1Y3 402 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 PARLQ9H300 379 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 NCOR1P1Q9H4R4 102 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 SRD5A3Q9H8P0 318 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 MSL2Q9HCI7 577 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 PARD6AQ9NPB6 346 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 ZNF71Q9NQZ8 489 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 TUBG2Q9NRH3 451 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 PLSCR4Q9NRQ2 329 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 UFSP2Q9NUQ7 469 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 JPT1Q9UK76 154 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 FZR1Q9UM11 496 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 PSG11Q9UQ72 335 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 LSM4Q9Y4Z0 139 aaKnown RBP2.67□□□□□ -1.98
U1.39-201ENST00000621562 DMRT1Q9Y5R6 373 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 URGCP-MRPS24S4R325 110 aa2.67□□□□□ -1.98
U1.39-201ENST00000621562 SPTAN1Q13813 2472 aaKnown RBP2.66□□□□□ -1.98
U1.39-201ENST00000621562 IGLV3-9A0A075B6K5 115 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 SMCO3A2RU48 225 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 ZNF729A6NN14 1252 aaPredicted RBP2.66□□□□□ -1.98
U1.39-201ENST00000621562 C15orf61A6NNL5 157 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 DEFB108AA8MXU0 73 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 MKRN2OSH3BPM6 223 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 MGST3O14880 152 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 HMGB3O15347 200 aaKnown RBP2.66□□□□□ -1.98
U1.39-201ENST00000621562 TIMM8AO60220 97 aaPredicted RBP2.66□□□□□ -1.98
U1.39-201ENST00000621562 GFRA3O60609 400 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 YPEL1O60688 119 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 PAGE4O60829 102 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 VENTXO95231 258 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 HRASP01112 189 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 IGHV3-13P01766 116 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 MBP02144 154 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 GYPAP02724 150 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 AMBPP02760 352 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 S100A9P06702 114 aaKnown RBP2.66□□□□□ -1.98
U1.39-201ENST00000621562 ADH4P08319 380 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 FTH1P19P0C7X4 201 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 STAG3L2P0CL84 134 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 STAG3L3P0CL85 134 aa2.66□□□□□ -1.98
U1.39-201ENST00000621562 HIST1H1BP16401 226 aaKnown RBP2.66□□□□□ -1.98
U1.39-201ENST00000621562 IL3RAP26951 378 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms