RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 ACOT13Q9NPJ3 140 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 C19orf73Q9NVV2 129 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 RAB22AQ9UL26 194 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 STUB1Q9UNE7 303 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 C13orf42A0A1B0GVH6 325 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 CRYZL1O95825 349 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 IGLV2-14P01704 120 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 DUTP33316 252 aaKnown RBP8.7□□□□□ -1.02
CPNE3-210ENST00000621245 RPL30P62888 115 aaKnown RBP8.7□□□□□ -1.02
CPNE3-210ENST00000621245 OR2B11Q5JQS5 317 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 C22orf42Q6IC83 251 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 ADAMTSL5Q6ZMM2 481 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 ZNF367Q7RTV3 350 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 ANKRD13BQ86YJ7 626 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 ADAD2Q8NCV1 583 aaKnown RBP8.7□□□□□ -1.02
CPNE3-210ENST00000621245 OR9G4Q8NGQ1 327 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 OR10J5Q8NHC4 309 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 GPHA2Q96T91 129 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 RETNQ9HD89 108 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 NDUFB11Q9NX14 153 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 COA4Q9NYJ1 87 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 SELENOKQ9Y6D0 94 aa8.7□□□□□ -1.02
CPNE3-210ENST00000621245 HECTD4Q9Y4D8 3996 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 TRAV1-2A0A0B4J238 106 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 IGKV1D-13A0A0B4J2D9 117 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 MSGN1A6NI15 193 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 H3BUA1 57 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 CSN3P07498 182 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 IGKV1-13P0DP09 117 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 SERPINB10P48595 397 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 TNXAQ16473 311 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 PRSS8Q16651 343 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 ZNF343Q6P1L6 599 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 VKORC1L1Q8N0U8 176 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 NUDCD2Q8WVJ2 157 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 ZNF430Q9H8G1 570 aaPredicted RBP8.69□□□□□ -1.02
CPNE3-210ENST00000621245 EDA2RQ9HAV5 297 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 RANGRFQ9HD47 186 aaPredicted RBP8.69□□□□□ -1.02
CPNE3-210ENST00000621245 AKIP1Q9NQ31 210 aa8.69□□□□□ -1.02
CPNE3-210ENST00000621245 A0A1B0GW64 132 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 E7EUB6 86 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 BMPR1BO00238 502 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 SSX5O60225 188 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 SAA1P0DJI8 122 aaPredicted RBP8.68□□□□□ -1.02
CPNE3-210ENST00000621245 MYOD1P15172 320 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 RAB3BP20337 219 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 NFYAP23511 347 aaPredicted RBP8.68□□□□□ -1.02
CPNE3-210ENST00000621245 CD40LGP29965 261 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 LGALS7P47929 136 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 UBE2KP61086 200 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 ARFRP1Q13795 201 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 SRSF12Q8WXF0 261 aaKnown RBP8.68□□□□□ -1.02
CPNE3-210ENST00000621245 ACOT12Q8WYK0 555 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 PHB2Q99623 299 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 GINS4Q9BRT9 223 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 ELOVL1Q9BW60 279 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 WFDC10AQ9H1F0 79 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 ATG5Q9H1Y0 275 aa8.68□□□□□ -1.02
CPNE3-210ENST00000621245 PEF1Q9UBV8 284 aaKnown RBP8.68□□□□□ -1.02
CPNE3-210ENST00000621245 TRDV1A0A1B0GX56 115 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 TMEM235A6NFC5 223 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 HMX3A6NHT5 357 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 BRI3O95415 125 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 HLA-AP01891 365 aaKnown RBP8.67□□□□□ -1.02
CPNE3-210ENST00000621245 PTHLHP12272 177 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 LYL1P12980 280 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 ZP3P21754 424 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 BRWD1-AS2P59051 145 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 MRPS15P82914 257 aaKnown RBP8.67□□□□□ -1.02
CPNE3-210ENST00000621245 RHOGP84095 191 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 EIF4EBP1Q13541 118 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-210ENST00000621245 EXOSC2Q13868 293 aaKnown RBP8.67□□□□□ -1.02
CPNE3-210ENST00000621245 HAGHQ16775 308 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 RTL8BQ17RB0 113 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 Q6ZS49 121 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 RNF167Q9H6Y7 350 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 ZMAT4Q9H898 229 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 RBM7Q9Y580 266 aaKnown RBP8.67□□□□□ -1.02
CPNE3-210ENST00000621245 DMRT1Q9Y5R6 373 aa8.67□□□□□ -1.02
CPNE3-210ENST00000621245 A0A0G2JLM5 398 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 A8MZ25 164 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 TEX22C9J3V5 150 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 PPP5D1E7EU14 171 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 PDCD5O14737 125 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 FCGR3BO75015 233 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 IGHV3-23P01764 117 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 CLEC2LP0C7M8 214 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 OR9G9P0C7N8 305 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 GADD45AP24522 165 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 MYL9P24844 172 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 CDNFQ49AH0 187 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 TEX45Q8NA69 505 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 LGALS14Q8TCE9 139 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 FAM110AQ9BQ89 295 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 ST6GALNAC5Q9BVH7 336 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 TXNL4BQ9NX01 149 aaKnown RBP8.66□□□□□ -1.02
CPNE3-210ENST00000621245 S4R3C0 116 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 X6R8D5 127 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 DNAH2Q9P225 4427 aa8.66□□□□□ -1.02
CPNE3-210ENST00000621245 TRBV9A0A0B4J1U6 114 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms