RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 RPL24P83731 157 aaKnown RBP9.05□□□□□ -0.96
CDH1-214ENST00000621016 SPANXN5Q5MJ07 72 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 DHRS13Q6UX07 377 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 OR2M7Q8NG81 312 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 TMEM170AQ8WVE7 144 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 C10orf35Q96D05 121 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 SMIM7Q9BQ49 75 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 UQCR10Q9UDW1 63 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 NTN3O00634 580 aaPredicted RBP9.04□□□□□ -0.96
CDH1-214ENST00000621016 CELA3BP08861 270 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 LHX2P50458 406 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 LINC00205P59089 165 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 PMP22Q01453 160 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 DAZAP2Q15038 168 aaPredicted RBP9.04□□□□□ -0.96
CDH1-214ENST00000621016 FAM78BQ5VT40 261 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 FOXL2NBQ6ZUU3 175 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 CACNG5Q9UF02 275 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 TECTAO75443 2155 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 MAP1LC3B2A6NCE7 125 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 CDIPTO14735 213 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 DEGS1O15121 323 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 CDS2O95674 445 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 RANP62826 216 aaKnown RBP9.04□□□□□ -0.96
CDH1-214ENST00000621016 RBPJQ06330 500 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 OR8B8Q15620 311 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 ALKBH6Q3KRA9 238 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 TMEM211Q6ICI0 200 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 OR2Z1Q8NG97 314 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 MAP1LC3BQ9GZQ8 125 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 SH2D2AQ9NP31 389 aa9.04□□□□□ -0.96
CDH1-214ENST00000621016 SERF1AO75920 110 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 LYZL6O75951 148 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 NEURL1O76050 574 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 CYC1P08574 325 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 CLDN18P56856 261 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 CKS1BP61024 79 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 HERV-K104P63124 156 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 IL13RA2Q14627 380 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 MPV17L2Q567V2 206 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 RFESDQ8TAC1 157 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 ACY3Q96HD9 319 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 TTTY12Q9BZ98 90 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 PLEKHF2Q9H8W4 249 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 Q9N2K0 584 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 RNF212BA8MTL3 300 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 PGLYRP1O75594 196 aaPredicted RBP9.03□□□□□ -0.96
CDH1-214ENST00000621016 KRASP01116 189 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 DEFA4P12838 97 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 NTF3P20783 257 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 ZNF266Q14584 549 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 TMEM42Q69YG0 159 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 TEX43Q6ZNM6 134 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 Q6ZRM9 215 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 TMEM251Q8N6I4 163 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 REPIN1Q9BWE0 567 aaKnown RBP9.03□□□□□ -0.96
CDH1-214ENST00000621016 VSIRQ9H7M9 311 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 B4GALT7Q9UBV7 327 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 FBXL7Q9UJT9 491 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 DEFB108AA8MXU0 73 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 K7N7A8 449 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 SPINK4O60575 86 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 IGLC2P0DOY2 106 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 IGLC3P0DOY3 106 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 GABRA2P47869 451 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 SELENOVP59797 346 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 PNRC1Q12796 327 aaPredicted RBP9.03□□□□□ -0.96
CDH1-214ENST00000621016 ZNF826PQ6ZT77 177 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 C1orf210Q8IVY1 113 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 CNEP1R1Q8N9A8 125 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 LFNGQ8NES3 379 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 OR5AU1Q8NGC0 362 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 FAM216AQ8WUB2 273 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 CITED1Q99966 193 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 FAM234AQ9H0X4 552 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 PLK3Q9H4B4 646 aa9.03□□□□□ -0.96
CDH1-214ENST00000621016 FNDC4Q9H6D8 234 aaPredicted RBP9.03□□□□□ -0.96
CDH1-214ENST00000621016 TSPOP30536 169 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 ARG2P78540 354 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 FAM90A2PQ658T7 463 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 APOBEC3DQ96AK3 386 aaPredicted RBP9.02□□□□□ -0.97
CDH1-214ENST00000621016 C1QTNF5Q9BXJ0 243 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 COL5A1P20908 1838 aaPredicted RBP9.02□□□□□ -0.97
CDH1-214ENST00000621016 C9orf172C9J069 976 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 MT-CO3P00414 261 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 PFN1P07737 140 aaKnown RBP9.02□□□□□ -0.97
CDH1-214ENST00000621016 EGR1P18146 543 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 FGF12P61328 243 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 ZNF816Q0VGE8 651 aaPredicted RBP9.02□□□□□ -0.97
CDH1-214ENST00000621016 FAM58AQ8N1B3 248 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 OR1B1Q8NGR6 318 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 SPIN2AQ99865 258 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 SPIN2BQ9BPZ2 258 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 RYDENQ9NUL5 291 aaKnown RBP9.02□□□□□ -0.97
CDH1-214ENST00000621016 IGHV3-43A0A0B4J1X8 118 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 OR5B21A6NL26 309 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 RBFOX2O43251 390 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDH1-214ENST00000621016 WISP2O76076 250 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 HAND1O96004 215 aa9.02□□□□□ -0.97
CDH1-214ENST00000621016 IFNA5P01569 189 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms