RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 HBE1P02100 147 aa11.44□□□□□ -0.58
CBWD1-226ENST00000618061 GRNP28799 593 aaKnown RBP11.44□□□□□ -0.58
CBWD1-226ENST00000618061 MRPS11P82912 194 aaKnown RBP11.44□□□□□ -0.58
CBWD1-226ENST00000618061 TEX36Q5VZQ5 186 aa11.44□□□□□ -0.58
CBWD1-226ENST00000618061 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
CBWD1-226ENST00000618061 ABHD12Q8N2K0 398 aa11.44□□□□□ -0.58
CBWD1-226ENST00000618061 TMEM147Q9BVK8 224 aa11.44□□□□□ -0.58
CBWD1-226ENST00000618061 SPTBN4Q9H254 2564 aa11.44□□□□□ -0.58
CBWD1-226ENST00000618061 LOC102723971A0A1B0GUV8 181 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 E7EQL1 145 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 PLAUP00749 431 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 TNFRSF1AP19438 455 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 ERVK-16P61578 105 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 RELBQ01201 579 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 DMRTC2Q8IXT2 367 aaPredicted RBP11.43□□□□□ -0.58
CBWD1-226ENST00000618061 ZNF439Q8NDP4 499 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 LINC01560Q8TB33 94 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 SLC25A10Q9UBX3 287 aaPredicted RBP11.43□□□□□ -0.58
CBWD1-226ENST00000618061 MAP1LC3B2A6NCE7 125 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 FAM90A27PA6NNH2 459 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 SHISA9B4DS77 424 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 GFRA3O60609 400 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 IFNA10P01566 189 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 OPN1MWP04001 364 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 OR8U8P0C7N1 319 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 OPN1MW2P0DN77 364 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 OPN1MW3P0DN78 364 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 NQO2P16083 231 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 CTRB1P17538 263 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 RAB11AP62491 216 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 SERF2P84101 59 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 CTRB2Q6GPI1 263 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 FAM24BQ8N5W8 94 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 H1FXQ92522 213 aaKnown RBP11.43□□□□□ -0.58
CBWD1-226ENST00000618061 HIST1H2BAQ96A08 127 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 RAB39BQ96DA2 213 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 CIB3Q96Q77 187 aaPredicted RBP11.43□□□□□ -0.58
CBWD1-226ENST00000618061 MAP1LC3BQ9GZQ8 125 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 HEYLQ9NQ87 328 aaPredicted RBP11.43□□□□□ -0.58
CBWD1-226ENST00000618061 MSRB2Q9Y3D2 182 aa11.43□□□□□ -0.58
CBWD1-226ENST00000618061 SMCO3A2RU48 225 aa11.42□□□□□ -0.58
CBWD1-226ENST00000618061 RAB7AP51149 207 aa11.42□□□□□ -0.58
CBWD1-226ENST00000618061 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
CBWD1-226ENST00000618061 ZNF429Q86V71 674 aa11.42□□□□□ -0.58
CBWD1-226ENST00000618061 ZCCHC14Q8WYQ9 949 aaKnown RBP11.42□□□□□ -0.58
CBWD1-226ENST00000618061 NPCDR1Q9BY65 106 aa11.42□□□□□ -0.58
CBWD1-226ENST00000618061 hCG_1809904A0A1W2PP81 198 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 A0A1W2PR64 198 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 A0A1W2PRV1 198 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 ZNF729A6NN14 1252 aaPredicted RBP11.41□□□□□ -0.58
CBWD1-226ENST00000618061 TMEM178BH3BS89 294 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 IGKV1-16P04430 117 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 HSPB1P04792 205 aaKnown RBP11.41□□□□□ -0.58
CBWD1-226ENST00000618061 RPL31P62899 125 aaKnown RBP11.41□□□□□ -0.58
CBWD1-226ENST00000618061 NHLH1Q02575 133 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 GCSAMLQ5JQS6 135 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 AVPI1Q5T686 147 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 OR4A47Q6IF82 309 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 OR4S2Q8NH73 311 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 GATAD1Q8WUU5 269 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 TMEM170AQ8WVE7 144 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 MBD3L1Q8WWY6 194 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 PINX1Q96BK5 328 aaKnown RBP11.41□□□□□ -0.58
CBWD1-226ENST00000618061 RHOVQ96L33 236 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 SLC39A9Q9NUM3 307 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 ARFGEF3Q5TH69 2177 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 PPIAL4EA0A075B759 164 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 TRAV1-1A0A0B4J248 108 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 NKX6-3A6NJ46 265 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 PPIAL4DF5H284 164 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 PPIAL4FP0DN26 164 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 BCL2P10415 239 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 COL8A2P25067 703 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 REG1BP48304 166 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 FLI1Q01543 452 aaPredicted RBP11.41□□□□□ -0.58
CBWD1-226ENST00000618061 RBPJQ06330 500 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 KHDC3LQ587J8 217 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 IQCF2Q8IXL9 164 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 OR10G4Q8NGN3 311 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 OR10G9Q8NGN4 311 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 OR10G7Q8NGN6 311 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 RNASE6Q93091 150 aaKnown RBP11.41□□□□□ -0.58
CBWD1-226ENST00000618061 LHX4Q969G2 390 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 HINT2Q9BX68 163 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 PARD6GQ9BYG4 376 aaPredicted RBP11.41□□□□□ -0.58
CBWD1-226ENST00000618061 DYNLRB1Q9NP97 96 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 RPUSD1Q9UJJ7 312 aaKnown RBP11.41□□□□□ -0.58
CBWD1-226ENST00000618061 PPIAL4AQ9Y536 164 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
CBWD1-226ENST00000618061 TRAV38-1A0A0B4J264 116 aa11.4□□□□□ -0.58
CBWD1-226ENST00000618061 LYNX1G3V0Z9 82 aa11.4□□□□□ -0.58
CBWD1-226ENST00000618061 CT45A6P0DMU7 189 aa11.4□□□□□ -0.58
CBWD1-226ENST00000618061 CT45A5P0DMU8 189 aa11.4□□□□□ -0.58
CBWD1-226ENST00000618061 CT45A7P0DMV0 189 aa11.4□□□□□ -0.58
CBWD1-226ENST00000618061 LYNX1P0DP58 116 aa11.4□□□□□ -0.58
CBWD1-226ENST00000618061 VDAC2P45880 294 aaPredicted RBP11.4□□□□□ -0.58
CBWD1-226ENST00000618061 HOXA1P49639 335 aaPredicted RBP11.4□□□□□ -0.58
CBWD1-226ENST00000618061 TMPRSS3P57727 454 aa11.4□□□□□ -0.58
CBWD1-226ENST00000618061 SPCS3P61009 180 aa11.4□□□□□ -0.58
CBWD1-226ENST00000618061 GNB2P62879 340 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms