RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 A0A075B6Q4 140 aa18.83■□□□□ 0.6
PTPRF-216ENST00000617451 TPPPO94811 219 aa18.83■□□□□ 0.6
PTPRF-216ENST00000617451 TTC9CQ8N5M4 171 aa18.83■□□□□ 0.6
PTPRF-216ENST00000617451 IL17DQ8TAD2 202 aa18.83■□□□□ 0.6
PTPRF-216ENST00000617451 ALMS1Q8TCU4 4167 aa18.83■□□□□ 0.6
PTPRF-216ENST00000617451 IGKV1D-8A0A087WSZ0 117 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 ERICH4A6NGS2 130 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 TUSC2O75896 110 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 SAA1P0DJI8 122 aaPredicted RBP18.82■□□□□ 0.6
PTPRF-216ENST00000617451 RAB6AP20340 208 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 OR10A3P58181 314 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 CDK10Q15131 360 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 NECAP1Q8NC96 275 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 FAM110AQ9BQ89 295 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 SLC2A8Q9NY64 477 aa18.82■□□□□ 0.6
PTPRF-216ENST00000617451 RBMY1BA6NDE4 496 aaKnown RBP18.81■□□□□ 0.6
PTPRF-216ENST00000617451 RBMY1EA6NEQ0 496 aaKnown RBP18.81■□□□□ 0.6
PTPRF-216ENST00000617451 IFITM5A6NNB3 132 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 CREBL2O60519 120 aaPredicted RBP18.81■□□□□ 0.6
PTPRF-216ENST00000617451 JTBO76095 146 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 ACTL6BO94805 426 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 CD7P09564 240 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 RBMY1DP0C7P1 496 aaKnown RBP18.81■□□□□ 0.6
PTPRF-216ENST00000617451 TALDO1P37837 337 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 MAP2K4P45985 399 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 DEFB114Q30KQ6 69 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 PRSS48Q7RTY5 328 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 MMD2Q8IY49 270 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 KCTD12Q96CX2 325 aaKnown RBP18.81■□□□□ 0.6
PTPRF-216ENST00000617451 CCDC90BQ9GZT6 254 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 DMRT1Q9Y5R6 373 aa18.81■□□□□ 0.6
PTPRF-216ENST00000617451 TRAV1-2A0A0B4J238 106 aa18.8■□□□□ 0.6
PTPRF-216ENST00000617451 PDCD5O14737 125 aa18.8■□□□□ 0.6
PTPRF-216ENST00000617451 AQP4P55087 323 aa18.8■□□□□ 0.6
PTPRF-216ENST00000617451 ARFRP1Q13795 201 aa18.8■□□□□ 0.6
PTPRF-216ENST00000617451 C15orf32Q32M92 178 aa18.8■□□□□ 0.6
PTPRF-216ENST00000617451 C10orf55Q5SWW7 151 aa18.8■□□□□ 0.6
PTPRF-216ENST00000617451 DEFB125Q8N687 156 aa18.8■□□□□ 0.6
PTPRF-216ENST00000617451 DYNLRB2Q8TF09 96 aa18.8■□□□□ 0.6
PTPRF-216ENST00000617451 NKX1-2Q9UD57 310 aaPredicted RBP18.8■□□□□ 0.6
PTPRF-216ENST00000617451 CRHBPP24387 322 aa18.79■□□□□ 0.6
PTPRF-216ENST00000617451 FAM209BQ5JX69 171 aa18.79■□□□□ 0.6
PTPRF-216ENST00000617451 ZNF645Q8N7E2 425 aa18.79■□□□□ 0.6
PTPRF-216ENST00000617451 DCUN1D5Q9BTE7 237 aa18.79■□□□□ 0.6
PTPRF-216ENST00000617451 ZC4H2Q9NQZ6 224 aa18.79■□□□□ 0.6
PTPRF-216ENST00000617451 ELF5Q9UKW6 265 aaPredicted RBP18.79■□□□□ 0.6
PTPRF-216ENST00000617451 METTL21EPA6NDL7 271 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 C2orf70A6NJV1 201 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 PPP5D1E7EU14 171 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 FCGR3BO75015 233 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 OR2J3O76001 311 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 FOLR2P14207 255 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 KIR2DS2P43631 304 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 SLC25A42Q86VD7 318 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 WFDC10AQ9H1F0 79 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 ZNF257Q9Y2Q1 563 aa18.78■□□□□ 0.6
PTPRF-216ENST00000617451 OR11H12B2RN74 326 aa18.77■□□□□ 0.6
PTPRF-216ENST00000617451 J3QRK9 145 aa18.77■□□□□ 0.6
PTPRF-216ENST00000617451 EDN2P20800 178 aa18.77■□□□□ 0.6
PTPRF-216ENST00000617451 DTYMKP23919 212 aa18.77■□□□□ 0.6
PTPRF-216ENST00000617451 SSX1Q16384 188 aa18.77■□□□□ 0.6
PTPRF-216ENST00000617451 SRD5A3Q9H8P0 318 aa18.77■□□□□ 0.6
PTPRF-216ENST00000617451 TECRQ9NZ01 308 aaKnown RBP18.77■□□□□ 0.6
PTPRF-216ENST00000617451 PRELID3BQ9Y3B1 194 aa18.77■□□□□ 0.6
PTPRF-216ENST00000617451 TEX22C9J3V5 150 aa18.76■□□□□ 0.59
PTPRF-216ENST00000617451 LGALS9O00182 355 aa18.76■□□□□ 0.59
PTPRF-216ENST00000617451 GGCTO75223 188 aaKnown RBP18.76■□□□□ 0.59
PTPRF-216ENST00000617451 HLA-AP01891 365 aaKnown RBP18.76■□□□□ 0.59
PTPRF-216ENST00000617451 HLA-DQB1P01920 261 aa18.76■□□□□ 0.59
PTPRF-216ENST00000617451 RPL30P62888 115 aaKnown RBP18.76■□□□□ 0.59
PTPRF-216ENST00000617451 GUCA2BQ16661 112 aa18.76■□□□□ 0.59
PTPRF-216ENST00000617451 KCTD9Q7L273 389 aa18.76■□□□□ 0.59
PTPRF-216ENST00000617451 NRG4Q8WWG1 115 aa18.76■□□□□ 0.59
PTPRF-216ENST00000617451 OR51E2Q9H255 320 aa18.76■□□□□ 0.59
PTPRF-216ENST00000617451 RBMX2Q9Y388 322 aaKnown RBP18.76■□□□□ 0.59
PTPRF-216ENST00000617451 OR2W1Q9Y3N9 320 aa18.76■□□□□ 0.59
PTPRF-216ENST00000617451 HMX3A6NHT5 357 aa18.75■□□□□ 0.59
PTPRF-216ENST00000617451 OR2C1O95371 312 aa18.75■□□□□ 0.59
PTPRF-216ENST00000617451 IGLV2-14P01704 120 aa18.75■□□□□ 0.59
PTPRF-216ENST00000617451 ARL6IP1Q15041 203 aa18.75■□□□□ 0.59
PTPRF-216ENST00000617451 OR2B11Q5JQS5 317 aa18.75■□□□□ 0.59
PTPRF-216ENST00000617451 VKORC1L1Q8N0U8 176 aa18.75■□□□□ 0.59
PTPRF-216ENST00000617451 ATG5Q9H1Y0 275 aa18.75■□□□□ 0.59
PTPRF-216ENST00000617451 MRPS7Q9Y2R9 242 aaKnown RBP18.75■□□□□ 0.59
PTPRF-216ENST00000617451 SLC22A5O76082 557 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 IL6RP08887 468 aaPredicted RBP18.74■□□□□ 0.59
PTPRF-216ENST00000617451 CTXN2P0C2S0 81 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 CD36P16671 472 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 RAB3BP20337 219 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 NFYAP23511 347 aaPredicted RBP18.74■□□□□ 0.59
PTPRF-216ENST00000617451 MYL9P24844 172 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 TBCEQ15813 527 aaPredicted RBP18.74■□□□□ 0.59
PTPRF-216ENST00000617451 CDNFQ49AH0 187 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 C19orf35Q6ZS72 473 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 GPHB5Q86YW7 130 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 WDR89Q96FK6 387 aaPredicted RBP18.74■□□□□ 0.59
PTPRF-216ENST00000617451 ST6GALNAC5Q9BVH7 336 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 FBXL7Q9UJT9 491 aa18.74■□□□□ 0.59
PTPRF-216ENST00000617451 NPIPB5A8MRT5 1133 aa18.73■□□□□ 0.59
PTPRF-216ENST00000617451 E7EUB6 86 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms