RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 C1QL2Q7Z5L3 287 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 IMMP2LQ96T52 175 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 SCN4AP35499 1836 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 TMEM229AB2RXF0 380 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 IGHV4-34P06331 123 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 FOXA3P55318 350 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 IGLV3-21P80748 117 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 ST6GALNAC3Q8NDV1 305 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF714Q96N38 554 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 ALKBH7Q9BT30 221 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 AKIRIN1Q9H9L7 192 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 SNRNP200O75643 2136 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 DICER1Q9UPY3 1922 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 HCP5Q6MZN7 132 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 OR4A5Q8NH83 315 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 SMOC1Q9H4F8 434 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 PPIAL4EA0A075B759 164 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 PPIAL4DF5H284 164 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 SLC17A3O00476 420 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 PPIAL4FP0DN26 164 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 COX5BP10606 129 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 GPX4P36969 197 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF826PQ6ZT77 177 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 SLC25A28Q96A46 364 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 PLSCR2Q9NRY7 297 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 PPIAL4AQ9Y536 164 aa9.11□□□□□ -0.95
CLTCL1-209ENST00000617103 COLCA2A8K830 154 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 F2RL2O00254 374 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 RRHO14718 337 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 TBX6O95947 436 aaPredicted RBP9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 RPL23P62829 140 aaKnown RBP9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 JPT1Q9UK76 154 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 PIKFYVEQ9Y2I7 2098 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 PAPPA2Q9BXP8 1791 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 IGKV3-7A0A075B6H7 116 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 C7orf71A4D174 169 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 H0YIZ8 118 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 KLK10O43240 276 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 ADIPOQQ15848 244 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 C10orf128Q5T292 105 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 SPRED2Q7Z698 418 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 CALYQ9NYX4 217 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF646O15015 1829 aaPredicted RBP9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 LOC101059948A0A1B0GTJ6 334 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 PTGDSP41222 190 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 ICAM4Q14773 271 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 CCDC144NLQ6NUI1 221 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF414Q96IQ9 312 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 CCL13Q99616 98 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 TMEM106BQ9NUM4 274 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 CLDN16Q9Y5I7 305 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 RBFOX2O43251 390 aaKnown RBP eCLIP9.1□□□□□ -0.958e-6■■□□□ 11.5
CLTCL1-209ENST00000617103 IL4P05112 153 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 ADRA2AP08913 450 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 TTTY12Q9BZ98 90 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 WNT5BQ9H1J7 359 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 DOCK5Q9H7D0 1870 aa9.1□□□□□ -0.95
CLTCL1-209ENST00000617103 IGFBP3P17936 291 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 DCAF10Q5QP82 559 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 OR4D5Q8NGN0 318 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 SGK494Q96LW2 274 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 IL6RP08887 468 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF324BQ6AW86 544 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 AMMECR1LQ6DCA0 310 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 SERF1AO75920 110 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 ZNF146Q15072 292 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 SPSB2Q99619 263 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 CD5P06127 495 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 PRSS2P07478 247 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 PSMG4Q5JS54 123 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 HIST1H2BLQ99880 126 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 SPOCK3Q9BQ16 436 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 RTN4RQ9BZR6 473 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 NRN1Q9NPD7 142 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 FBLN5Q9UBX5 448 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 NEUROG3Q9Y4Z2 214 aa9.09□□□□□ -0.95
CLTCL1-209ENST00000617103 NHSL1Q5SYE7 1610 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 SCGB1A1P11684 91 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 ZNF525Q8N782 197 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 RABAC1Q9UI14 185 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 HTN1P15515 57 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 ANOS1P23352 680 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 MBNL2Q5VZF2 373 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 TTC9CQ8N5M4 171 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 ARL6IP6Q8N6S5 226 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 FOXD3Q9UJU5 478 aaPredicted RBP9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 FAM90A27PA6NNH2 459 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 C5orf67F2Z3F1 127 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 ZNHIT1O43257 154 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 CCL8P80075 99 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 TFF2Q03403 129 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 TBR1Q16650 682 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 LINC00114Q6XXX2 140 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 SLC22A18ASQ8N1D0 253 aa9.08□□□□□ -0.96
CLTCL1-209ENST00000617103 NPIPB3Q92617 1050 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms