RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 SSX3Q99909 188 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 COA4Q9NYJ1 87 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 BET1LQ9NYM9 111 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 IGHV3-72A0A0B4J1Y9 119 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 A0A1B0GU03 582 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 M0QZK8 103 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 SNRNP70P08621 437 aaKnown RBP9.35□□□□□ -0.91
TARDBP-217ENST00000616545 UBE2KP61086 200 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 HES1Q14469 280 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 DEFB112Q30KQ8 113 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 GSG1LQ6UXU4 331 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 RBMS3Q6XE24 437 aaKnown RBP9.35□□□□□ -0.91
TARDBP-217ENST00000616545 Q8N6K4 173 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 DMBX1Q8NFW5 382 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 LHFPL5Q8TAF8 219 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 SSMEM1Q8WWF3 244 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 EAF1Q96JC9 268 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-217ENST00000616545 KIAA1456Q9P272 454 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 POMT1Q9Y6A1 747 aa9.35□□□□□ -0.91
TARDBP-217ENST00000616545 NAV3Q8IVL0 2385 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 HMX3A6NHT5 357 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 SNAPC5O75971 98 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 OR2F2O95006 317 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 OR2A4O95047 310 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 NDUFA3O95167 84 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 KRASP01116 189 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 IGKV1-39P01597 117 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 IGKV1D-39P04432 117 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 SULT1A3P0DMM9 295 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 SULT1A4P0DMN0 295 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 TMEM11P17152 192 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 SRD5A1P18405 259 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 IER3P46695 156 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 NMSQ5H8A3 153 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 GGNBP1Q5YKI7 109 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 THOC7Q6I9Y2 204 aaKnown RBP9.34□□□□□ -0.91
TARDBP-217ENST00000616545 LYZL2Q7Z4W2 148 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 PUSL1Q8N0Z8 303 aaKnown RBP9.34□□□□□ -0.91
TARDBP-217ENST00000616545 UXS1Q8NBZ7 420 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 OR5M8Q8NGP6 311 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 OR2A7Q96R45 310 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 ZFP57Q9NU63 452 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 FKBP11Q9NYL4 201 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 TCF19Q9Y242 345 aa9.34□□□□□ -0.91
TARDBP-217ENST00000616545 RRHO14718 337 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 NBR2O15453 112 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 FGF16O43320 207 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 IGKV1-5P01602 117 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 IGLV2-23P01705 113 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 IL6RP08887 468 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-217ENST00000616545 HOXB5P09067 269 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 P0C879 139 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 MAS1LP35410 378 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 G6PCP35575 357 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 BCAP31P51572 246 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 SRSF4Q08170 494 aaKnown RBP9.33□□□□□ -0.92
TARDBP-217ENST00000616545 SMCO1Q147U7 214 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 MMDQ15546 238 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 AARDQ4LEZ3 155 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 FOXRED2Q8IWF2 684 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 BCL6BQ8N143 479 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-217ENST00000616545 TMEM167AQ8TBQ9 72 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 PIFOQ8TCI5 191 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 C2orf50Q96LR7 162 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 RBM14Q96PK6 669 aaKnown RBP9.33□□□□□ -0.92
TARDBP-217ENST00000616545 SMR3AQ99954 134 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-217ENST00000616545 TMEM140Q9NV12 185 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 MGAT4CQ9UBM8 478 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 PRNDQ9UKY0 176 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 HIVEP2P31629 2446 aa9.33□□□□□ -0.92
TARDBP-217ENST00000616545 ACANP16112 2415 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 C5orf51A6NDU8 294 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 A6NDX4 124 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 SRRM4A7MD48 611 aaKnown RBP9.32□□□□□ -0.92
TARDBP-217ENST00000616545 FAM90A26D6RGX4 464 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 H3BUX3 64 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 CLDN34H7C241 214 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 KBTBD11O94819 623 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 LY86O95711 162 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 CRYGBP07316 175 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 SAA1P0DJI8 122 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-217ENST00000616545 PSG5Q15238 335 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 OR4A47Q6IF82 309 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 ZNF429Q86V71 674 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 MMD2Q8IY49 270 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 OR52E5Q8NH55 327 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 OR4A16Q8NH70 328 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 ZNF418Q8TF45 676 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-217ENST00000616545 GPR146Q96CH1 333 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 JMJD8Q96S16 334 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 NMES1Q9C002 83 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 PRR13Q9NZ81 148 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 ZNF257Q9Y2Q1 563 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 MOB4Q9Y3A3 225 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 CSMD1Q96PZ7 3565 aa9.32□□□□□ -0.92
TARDBP-217ENST00000616545 C13orf42A0A1B0GVH6 325 aa9.31□□□□□ -0.92
TARDBP-217ENST00000616545 CYSRT1A8MQ03 144 aa9.31□□□□□ -0.92
TARDBP-217ENST00000616545 UPK2O00526 184 aa9.31□□□□□ -0.92
TARDBP-217ENST00000616545 GOSR2O14653 212 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms